Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq14742 499 3e-136 >seq14742 Length=52551 Score = 499 bits (552), Expect = 3e-136 Identities = 727/1022 (71%), Gaps = 4/1022 (0%) Strand=Plus/Plus Query 166158 TGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCT 166217 ||||| |||| | || |||||| | | ||| ||||| || ||||| |||||||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCA 37818 Query 166218 GGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACT 166277 || ||||||||| | || ||||||| |||| |||| |||||| | ||||| || ||| Sbjct 37819 GGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACT 37878 Query 166278 TTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTGGAGGGTGCAAACTTT 166337 || || || ||||| || ||||| | || ||| | || ||| ||||| Sbjct 37879 TTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTC 37938 Query 166338 CTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTC-TG 166396 | || || || ||||| ||||| ||| | ||||| ||| ||| || || |||| || Sbjct 37939 TTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCTTTA-TTATTCTTATG 37997 Query 166397 GGGTCCTGAGGCTCAAGGGGA-TTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCT 166455 ||| ||||| || ||||| || ||| || | ||||| ||| | || || || ||| | | Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACTC-GTTGGTGTCAATTAGGTGGTCTATGGACAT 38056 Query 166456 TTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCG 166515 || ||||| | || || |||| | ||||||| || ||| | || || |||||||| | Sbjct 38057 TTATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTG 38116 Query 166516 CTCGTCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCT 166575 ||||| ||| | | ||||| |||||||| || ||||| || | |||||| | || | Sbjct 38117 CTCGTTCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTTT 38176 Query 166576 TCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTT 166635 | ||| || || | || ||||| | || ||||| | |||||||| ||||| || Sbjct 38177 TTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGTT 38236 Query 166636 TCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACAC 166695 | || || |||| || ||||| ||| | | || | ||||| ||||| |||||||| Sbjct 38237 TTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACTT 38296 Query 166696 TGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCA 166755 | |||||||| || |||||||||||||||||| || | || | ||| | | | ||| | Sbjct 38297 TAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCTA 38356 Query 166756 TCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCA 166815 | || |||| ||| || || ||||| | | | |||||||||| || || || ||| Sbjct 38357 TTCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTCC 38416 Query 166816 AGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATT 166875 ||||| || | || |||| |||||||| || |||||||| ||||| ||||| | | Sbjct 38417 GTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTCT 38476 Query 166876 GGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGT 166935 ||||||| || || || |||| || ||||| | ||| | || ||||| ||||| Sbjct 38477 GGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTTC 38536 Query 166936 TTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACC 166995 ||||||||||| | ||||| |||| | || ||| | |||| | ||| | || Sbjct 38537 TTGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAATT 38596 Query 166996 TTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAA 167055 | |||||||||||||| ||||| |||||| | | ||||| |||||||| || || |||| Sbjct 38597 TACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAAA 38656 Query 167056 CCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCG 167115 | ||||| || || || ||| | || ||||| ||||| ||| |||||||||| | | Sbjct 38657 CTTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAAG 38716 Query 167116 ATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCT 167175 | ||||| ||||| || | |||||||||||||| || | ||| | ||||| ||||| | Sbjct 38717 ACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTAT 38776 Query 167176 AA 167177 || Sbjct 38777 AA 38778 Score = 260 bits (288), Expect = 2e-64 Identities = 283/373 (76%), Gaps = 2/373 (1%) Strand=Plus/Minus Query 164763 tttttGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCT 164822 |||||| || ||| | ||| || | |||||| | || ||||||||||||||||| | Sbjct 12272 TTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTCGGTGTTAT 12213 Query 164823 TATGATCCCCTGTTTGCTCGCCGCTACAATTTGTTTT-ATTACTGCATTCATCGCTGCTC 164881 |||||||| || | | ||||| | ||| || || | || ||||||||||| | Sbjct 12212 CATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCATCGCTGCAC 12154 Query 164882 CCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACA 164941 | || || || || |||||||||||||| || || | ||||| || | ||||| |||| Sbjct 12153 CTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACA 12094 Query 164942 ACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTA 165001 ||||||||||||||||||| ||||| | || ||||| || || | || ||||| || | Sbjct 12093 ACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTTCTACCCAA 12034 Query 165002 TTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTG 165061 ||||||||||| || | | ||||| ||||| |||||||||||||||||||| || | | Sbjct 12033 TTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCG 11974 Query 165062 TCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACC 165121 | | ||||||| || | ||| | ||||||||||||||||| |||||| | ||||||| Sbjct 11973 TTTGCCACTTCTTCTTAGGTATTTGCTGCTACATGGGTCGTGAATGGGAATTATCTTACC 11914 Query 165122 GCCTCGGTATGCG 165134 | | |||||||| Sbjct 11913 GTTTAGGTATGCG 11901 Score = 257 bits (284), Expect = 2e-63 Identities = 267/350 (76%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 165266 TCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTG 165325 |||| |||||||| || || |||||||||||||| || ||||||||| | || ||||||| Sbjct 9283 TCGTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTG 9224 Query 165326 GGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCG 165385 | ||||| ||||| || | |||||||| ||||| || | || ||||| || | Sbjct 9223 GTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAA 9164 Query 165386 TCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAG 165445 |||| || || ||||||| || | ||| | || || || || || |||||||||| Sbjct 9163 TCCGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAG 9104 Query 165446 AGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCAT 165505 | || || ||||| || ||||| || || ||||| || ||| | || ||||||||||| | Sbjct 9103 AAACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTT 9044 Query 165506 CCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCT 165565 | |||||||| || ||||| | ||||||||| | || || ||||| ||||||||||| | Sbjct 9043 CTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTT 8984 Query 165566 GGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTC 165615 ||||||||||| | ||| || || |||||||||||| | ||||| ||| Sbjct 8983 GGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 113 bits (124), Expect = 5e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 165130 ATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTC 165189 ||||||||||||||| ||||| || || || || || |||||| | ||||| ||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 165190 CTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGT 165249 | |||||||| |||| ||||| ||||||||||||||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 165250 ACTTTTAACT 165259 ||||| |||| Sbjct 10357 ACTTTCAACT 10348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563546482544000