Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq14182 150 4e-31 seq334 127 5e-24 seq11472 116 8e-21 >seq14182 Length=2243 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || || || || |||||||| || || || ||||| || || ||||| | ||||| Sbjct 579 CAATACCAGATGCAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCCATC 638 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| |||||||| || |||||||| || || || ||||| |||||||| || || ||||| Sbjct 639 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 698 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || |||||| |||||||||||||| || ||||| || || || | || Sbjct 699 CTGAATCTTGCTCTTGACATTCTCAATGGTGTCGCTGCTCTCCACCTCCAGTGTGATGGT 758 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || || || || | |||||| Sbjct 759 CTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 791 >seq334 Length=28022 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || || ||||| |||||||| || || || ||||| || || || || | ||||| Sbjct 27855 CAACACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATC 27796 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || |||||||| || || ||||| || || || ||||| || || || || || ||||| Sbjct 27795 CTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 27736 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || |||||| ||||||||||| || || ||||| || || || | || Sbjct 27735 CTGAATCTTGCTCTTGACATTCTCAATGGTATCGCTGCTCTCCACCTCCAGAGTGATGGT 27676 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || || || || | |||||| Sbjct 27675 CTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 27643 >seq11472 Length=8128 Score = 116 bits (128), Expect = 8e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| || ||||| || | ||||| || Sbjct 5140 ACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCC 5081 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| |||||||| ||||| || || || Sbjct 5080 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATCCCTTCCTTATCCTGG 5021 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||| || |||||||||||||| Sbjct 5020 ATCTTGCTCTTTACATTCTCAATGGTGTC 4992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109250957844575