Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq14742 197 4e-46 >seq14742 Length=52551 Score = 197 bits (218), Expect = 4e-46 Identities = 273/373 (73%), Gaps = 8/373 (2%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||||| ||| |||| |||||||| |||||| | || | || |||||||| || | Sbjct 12271 TTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTCGGTGTTATC 12212 Query 25862 ATGATACCCTGC-TTACTCGCAGCCACTACATGTTTT-ATACTTGCCTTCATCGCAGCAC 25919 ||||| |||| | ||| | |||| ||| | ||| || || | || |||||||| |||| Sbjct 12211 ATGAT-CCCTACATTATTAACAGCTACTTC-TGTATTCATCATCGCTTTCATCGCTGCAC 12154 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | || || ||||| ||||| || |||||||||||||| || || ||| | |||||||||| Sbjct 12153 CTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACA 12094 Query 25980 ATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGA 26039 | || || || || || || || || | || ||||| || || ||||||| ||||| | Sbjct 12093 ACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTTCTACCCAA 12034 Query 26040 TCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 | ||||||||| | | || |||||| ||||||| || || || || ||| | || Sbjct 12033 TTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCG 11974 Query 26100 TCTTCCACTTCTTAATAGG-AGTAGCAGC-ATATGCAGGGAGACAGTGGGAACTATCTTA 26157 | | ||||||||| |||| | | || || | ||| || | | |||||| ||||||| Sbjct 11973 TTTGCCACTTCTTCTTAGGTATTTGCTGCTACATG--GGTCGTGAATGGGAATTATCTTA 11916 Query 26158 CAGACTAGGAATG 26170 | | |||| ||| Sbjct 11915 CCGTTTAGGTATG 11903 Score = 170 bits (188), Expect = 6e-38 Identities = 247/349 (71%), Gaps = 0/349 (0%) Strand=Plus/Minus Query 26304 TCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTG 26363 |||| |||||||| || || || || || |||||||||||||| ||| |||||||||| Sbjct 9283 TCGTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTG 9224 Query 26364 GGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTA 26423 | || || ||||| | | ||| |||| |||||||| || || ||||| || | | Sbjct 9223 GTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAA 9164 Query 26424 TTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAG 26483 | ||||| || || | | || || | || || || || || ||||| |||| Sbjct 9163 TCCGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAG 9104 Query 26484 AGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGA 26543 | ||||| || ||||| |||||||| || |||||||| | ||||| || || || || Sbjct 9103 AAACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTT 9044 Query 26544 GTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATAT 26603 ||| || ||| ||||| | || ||||| | ||| ||||||| || ||||| || | Sbjct 9043 CTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTT 8984 Query 26604 GGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTT 26652 || | || || | ||||| | || |||||||| ||| |||| || || Sbjct 8983 GGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATT 8935 Score = 80.6 bits (88), Expect = 8e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26654 AACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTA 26713 ||||| ||||| |||||||| || | | || || || || ||||| || | Sbjct 8283 AACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACATC 8224 Query 26714 TTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCA 26773 | ||||| |||||| | || | ||||||||||||||||||||||| || ||||| ||| Sbjct 8223 ATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCCCA 8164 Query 26774 CTTGACTTAGCATC 26787 | |||||||| || Sbjct 8163 TTAGACTTAGCGTC 8150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146698129949400