Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq14742 223 1e-53 >seq14742 Length=52551 Score = 223 bits (246), Expect = 1e-53 Identities = 280/382 (73%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 36584 CCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTG-AGATACCAA 36642 || |||||||| | ||| | |||||||| || |||| ||| || | | ||||| | Sbjct 11900 CCGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGTA-GCAGCAAATACCTA 11958 Query 36643 TGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGG 36702 || |||||| | || || | ||| || || || ||||| ||||||||||| || | | Sbjct 11959 AGAAGAAGTGGCAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCTAAAG 12018 Query 36703 TTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTG 36762 || ||||||||| ||||||||||| || | ||| || ||||| |||| || || | | Sbjct 12019 ATGAAGCTTCCCAAATTGGGTAGAAATGTAAACCAATAGCGTTTGATGTAGGAACAACAG 12078 Query 36763 CCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCAT 36822 | |||||||||||||||||||| || | ||||| || || || |||||||||||||||| Sbjct 12079 CACCAGAGATGATGTTGTTTCCGTATAATAATGAACCAGAAACTGGCTCACGAATACCAT 12138 Query 36823 CTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAA 36882 | ||||| || ||||| ||||| | || || || | ||| | | |||||||| | Sbjct 12139 CGATATCAACTGGAGGTGCAGCGATGAAAGCGATGATGAATACAGAAGTAGCTGTTAATA 12198 Query 36883 GTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAA 36942 || ||||||||| | || || ||||| || | || | ||||| | ||||| |||| Sbjct 12199 ATGTAGGGATCATGATAACACCGAACCAACCGATGTATAAACGGTTTTCAGTACTAGTAA 12258 Query 36943 CCCAGTCACATAAACTTTCCCA 36964 ||| ||||| |||| | |||| Sbjct 12259 TCCATTCACAAAAACGTGCCCA 12280 Score = 188 bits (208), Expect = 2e-43 Identities = 250/347 (72%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 36105 AAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTG 36164 || ||||| | || || |||||||| || | || | ||| || | ||| || | | Sbjct 8935 AATCCGTTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAATACCAACT 8994 Query 36165 ACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGG 36224 || ||||||||||| | |||||| ||||| || || || || ||| || ||| Sbjct 8995 ACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAAAGAAGCGTATTGG 9054 Query 36225 AAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGG 36284 ||||| | | |||||||| ||||| || || |||||||| || || ||||||||||| Sbjct 9055 AAGATTAAACGTCCAAAGTAACCATGTGCAGCTACAATGTTGTATGTTTCTTCTTCTTGA 9114 Query 36285 CCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAA 36344 |||||||| ||||| | ||| |||||| |||| |||||||| || | || ||| Sbjct 9115 CCGAATTTGTATCCTTCGTTAGCAGATTCGTTTTCAGTAGTTTCACGGATTAAAGATGAA 9174 Query 36345 GTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCG 36404 || || | |||||||| |||| |||||| | ||||| ||||| || |||||||| Sbjct 9175 GTTACTAATGAACCGTGCATTGCAGAGAATAATGAACCACCAAATACACCAGCAACACCT 9234 Query 36405 AGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGAC 36451 | ||| ||||| || |||||||| || ||||| || || || || || Sbjct 9235 AACATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCTTGGAAAAC 9281 Score = 109 bits (120), Expect = 2e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| ||| |||| ||| | |||||||||||| || |||||||| |||||||||||||| Sbjct 8144 TCAACAGACGCTAAGTCTAATGGGAAGTTGTGCGCATTACGCTCGTGCATAACTTCCATA 8203 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 ||||||| |||||||| | ||||| |||||||| | || | || | || ||| Sbjct 8204 CCTAAGTTAGCACGGTTGATGATGTCTGCCCAAGTGTTTAATACACGACCTTGAGAGTCA 8263 Query 36084 ACGACTGACTGATTGAAGTT 36103 || ||||| || |||||||| Sbjct 8264 ACTACTGATTGGTTGAAGTT 8283 Score = 104 bits (114), Expect = 7e-18 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 36455 CATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCC 36514 ||| || |||||||| || || ||||| | ||||||||||||||||||| |||||||| Sbjct 10343 CATGAAGTTGAAAGTTCCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGTCC 10402 Query 36515 AAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACA 36574 | ||| |||| | |||||| ||| || |||||||| || || || ||||||||| Sbjct 10403 GATAGGATAGATGATGAATACTGCAGTAGCAGCTGCAACTGGAGCAGAGTAAGCTACAGC 10462 Query 36575 TATCCACGGCCTCAT 36589 ||||| || | ||| Sbjct 10463 AATCCAAGGACGCAT 10477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150425411668650