Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq2519 152 2e-32 seq16013 100 9e-17 seq11482 93.3 1e-14 seq8522 80.6 8e-11 >seq2519 Length=537 Score = 152 bits (168), Expect = 2e-32 Identities = 138/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 24330 GCCGGGAGTACATGAACAGCCTGGAAGACTCCTCCATGGAGGAGGTCAAGCAGGCGATCC 24389 |||||||| | |||||||||| || || ||||||||||||||| ||||| |||||||| Sbjct 364 GCCGGGAGCATCTGAACAGCCTTGACGAATCCTCCATGGAGGAGATCAAGGCGGCGATCC 423 Query 24390 GGTCCGAACCCTGGCTCAACGCCTACTTCGAGATCGGCGAGAAGTTCATCCGCACCCGCA 24449 |||||||||| ||| | | ||||||||| ||||||||||||| |||||| ||| | | Sbjct 424 GGTCCGAACCGTGGTTGGCGGACTACTTCGACATCGGCGAGAAGTACATCCGGACCAGAA 483 Query 24450 ACCGACGAGTGTGGTTCTCGTTCTCCGGCTTGCGCCACAACCTCGACAGCATCA 24503 | || || | | | | ||| |||| ||| | ||||||||||||||||||| Sbjct 484 ATCGCCGTATCAGCTATGCCTTCGCCGGGTTGAGGCACAACCTCGACAGCATCA 537 >seq16013 Length=2360 Score = 100 bits (110), Expect = 9e-17 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 21314 CCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCG 21373 || ||||||| ||| |||||||| || | | |||||||| | ||||||| ||| Sbjct 2279 CCGGTGATCGCGCTCTCGCAGCTTTCGCGTGCGGTCGAGCAGCGCGAGGACAAGCGCCCG 2220 Query 21374 ATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTC 21433 ||| | |||||||||||||| || || |||||||||||||||| || || | ||| Sbjct 2219 ATGCTCTCGGACCTGCGCGAATCGGGCTCGATCGAGCAGGACGCGGACATGGTGTGGTTT 2160 Query 21434 GTGTACCGCGACGAGGTCTACCACC 21458 || || |||||||| |||||||| Sbjct 2159 GTCTATCGCGACGACTACTACCACC 2135 >seq11482 Length=9116 Score = 93.3 bits (102), Expect = 1e-14 Identities = 126/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 21286 CAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTC 21345 |||| ||| || | |||||| | | || | |||| ||||||||||||| |||| Sbjct 4599 CAAGGCGCTCGCCAAGGAGCTCGCGGTGCCGATCATCGCGCTGTCGCAGCTCTCCCGCCA 4540 Query 21346 CCTGGAGCAGCGGCCGA--ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCG 21403 | ||| ||| || || ||||||| ||| | | ||||||||||| || || || Sbjct 4539 GGTCGAG-AGCCGC-GACGACAAGCGCCCGCAACTCGCCGACCTGCGCGAATCGGGCTCG 4482 Query 21404 ATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTCTACC 21455 ||||||||||||||||| || | |||||| | |||||||||||| ||||| Sbjct 4481 ATCGAGCAGGACGCCGACGTCGTGATGTTCATCTACCGCGACGAGTACTACC 4430 >seq8522 Length=627 Score = 80.6 bits (88), Expect = 8e-11 Identities = 117/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 21294 TGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGC 21353 |||| | ||| || || | || || | | ||| |||||||| ||| | ||| Sbjct 459 TGGCCAAGGATCTCGGCGTGCCGGTCCTGGCGCTCTCGCAGCTGTCGCGCGAGGTCGAGA 400 Query 21354 AGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGG 21413 |||| || ||| || || | ||||||||||| | ||||| || |||||||||||| Sbjct 399 AGCGCCCCGACATACGGCCCCAGCTGTCGGACCTGAGGGAGTCGGGCTCGATCGAGCAGG 340 Query 21414 ACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGT-CTACC 21455 ||||||||||| | || ||||| ||||| || ||| | ||||| Sbjct 339 ACGCCGATGTGGTGATATTCGTCTACCGGGA-GAGCTACTACC 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157080129244650