Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq9554 219 2e-52 seq15910 120 1e-22 seq13590 95.1 5e-15 seq12362 87.8 7e-13 >seq9554 Length=3714 Score = 219 bits (242), Expect = 2e-52 Identities = 1302/2046 (64%), Gaps = 85/2046 (4%) Strand=Plus/Plus Query 53021 CTGGATTTGGACGGA-CACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACT 53079 |||||| ||| | || | |||| || |||||||||| | | ||||||||||| | Sbjct 471 CTGGATCTGGTCCGATCCCGAA-CGGACCGACCGGCTTGCCCGGGACTACAACGAGCGGT 529 Query 53080 TCAACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTATCGC 53139 ||||||||||||| ||||| ||| ||||| ||||| ||| || |||| ||| Sbjct 530 TCAACAACATCGCACCGCGAAGTTTCAACGGCGATCACCTTCAGCTTCCAGGCGCCTCG- 588 Query 53140 TGCG-CTTCGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGC 53198 ||| ||| || | | ||||||| |||| |||||||||| ||| || || Sbjct 589 GGCGCCTTTTCTCTTTATGGGCACCAGAAACGCGGCATCTGGCGCATCATCTCGGCGGGT 648 Query 53199 GATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGGGC 53258 | || ||||| ||||| |||||||| |||||||| | |||||| ||| | | | Sbjct 649 TCGACCTATCTCGCCCACGCCGTCGGCGCTGGCAAGACCATGACGATGGCGGCGGCAGTC 708 Query 53259 ATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATG 53318 |||||| || |||||||| ||| | |||| ||||| | || || ||| Sbjct 709 ATGGAGCAGAAGCGGCTCGGGCTGATCGCCAAGGCGATGCTGGTCGTTCCCGGTCACTGC 768 Query 53319 CTCGCGCAATTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCG 53378 |||||||| |||||||||||||| | ||| |||||| |||| |||| | || || Sbjct 769 CTCGCGCAGGCGGCGCGCGAGTTCCTGGCGCTCTACCCGACCGCCCGCATCCTCGTTGCC 828 Query 53379 GACGAGCAGAATTTCCACACCCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAAC 53438 ||||| || ||| || | || || | | ||| |||| | ||||| | Sbjct 829 GACGAAACCAACTTCACCAAGGATAAGCGACATCTCTTCCTCGCCCGCGCCGCCACGGCC 888 Query 53439 AACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGCCGCATCGGCATGTCCG-ACGA 53497 || ||| |||||||||||||| || |||||||| || |||| ||| |||| || Sbjct 889 AATTGGGATGCGATCATCATCACCCATTCGGCGTTTCGCTTCATCTCCAT-TCCGTCCGC 947 Query 53498 GTACGCCTCGGCGTTCATCCGCGACCAGATCGACGAGTGGAAAGCCGCGCTCGACGAGAC 53557 | || | | | |||| ||| || | || | ||| | ||| | || Sbjct 948 CTTCGAGCAGCAGATGATCCAGGACGAGTTGGAGCTTTACGAAGACCTGCTGACCAAGGT 1007 Query 53558 GGACAAGGGCGACCGCATCACGCGCAAGCAGATCGAGCGCCGCATCGNNNNNNNNNNNNN 53617 ||| | ||||||| | | ||||||| | | ||||| | | | Sbjct 1008 CGACGGCGACGACCGCGTGTCCCGCAAGCGGCTTGAGCGGCTGAAGGAGGGGCTCAAGGA 1067 Query 53618 NNNGCTGGAGGCGAAACAGGGCGGCGAGAAG-AAGGACAAGGTGCTGTCGTTCGAGGAGC 53676 ||| || || | |||| | | |||||| | | ||| | | |||| Sbjct 1068 ACGGCTCGAAGC-------GCTCGCGACACGCAAGGACGATCTTCTGACCATATCCGAGC 1120 Query 53677 TGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAGTTCCGAAAACTCGACTTCGCGA 53736 | ||| |||| | | ||||||||||| ||| |||||||| || ||| ||| || | Sbjct 1121 TCGGCATCGATCAGATCATCGTCGACGAGGCCCAGGAGTTCCGCAAGCTCTCCTTTGCCA 1180 Query 53737 CGCAGCA-GAGCAACATCAAGGGCATCGACCCGGCGGGCTCGCAGCGCGCGATGGACCTG 53795 | || || | | | | ||||| |||| ||| ||||||||||| ||| |||||| Sbjct 1181 C-CAACATGTCGAGCTTGAAGGGAGTCGATCCGAACGGCTCGCAGCGGGCGTGGGACCTA 1239 Query 53796 TTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCCGCGCGCTCGTGGCCGCGTCC 53855 | | | ||| || | | | | |||||| | ||||| ||||| ||| || || Sbjct 1240 TACGTCAAGTCCCGCTTCGTTGAAACCAAGAACCTCGGCCGTGCGCTGGTGCTGGCCTCG 1299 Query 53856 GGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCACAACGCTTCTTCCAGCCC 53915 ||||| ||| |||| |||||| | ||||| | | | | | || ||||| || | Sbjct 1300 GGCACCCCGATCACCAACACGCTCGGCGAAATGTTCTCGGTGCAGCGCTTTCTCGGCATC 1359 Query 53916 GAGCAGCTTGCCGAGGATGGTCTGGATACGTTCGACGCGTGGGCCAACCAATACGGTGAC 53975 ||| ||| ||| ||| ||| | |||||| || |||||| || ||| || Sbjct 1360 GAGGCGCTGAGGGAGCGTGGCCTGCACGAGTTCGATGCCTGGGCCTCGACATTCGGCGAT 1419 Query 53976 ATCGTTGCGGGCTTCGAGCAGAACGCCGCCGGCGGCTACGAGGTCGTGAGCCGGTTCGCG 54035 | | | |||||| | | | ||| ||| || || | || || || Sbjct 1420 GTGACGACCGAACTCGAGCTTCAGCCATCGGGCAAGTACAAGCCGGTCACGCGCTTTGCC 1479 Query 54036 AAGTTCCAGAACGTGCCCGAGCTGATGCGCCGCG-TGCGCTCGTTCATGGACATCCTGAC 54094 | ||| |||||||||||||| || |||| | | ||||| || |||| || || Sbjct 1480 ACTTTCGTCAACGTGCCCGAGCTCAT-CGCCATGTTCCGCTCCTTTGCGGACGTCGTGTT 1538 Query 54095 GAGCCAGCAGCTCTCGCAGTACGTGGATCGTCCGGCGATCGAGGGCGGCGGCCGTCAGAT 54154 | || | | ||| || ||| | |||||| || | |||| || ||||| Sbjct 1539 GCCGGAGGATTTGCGGCAATATGTGAAGGTGCCGGCGGTCTCGACCGGCAAGCGCCAGAT 1598 Query 54155 CATGGTCACGCCGGAGCCGT---TCGGATACAAGGCGTACCAGAAGGCGCTCGAGCAGCG 54211 || || | | || | ||||| || | |||| ||||||| | |||||| ||| Sbjct 1599 CA-GGAC-CTCCAG-GCCGTCCGCCGCTTTCAAGCGCTACCAGACCGTGCTCGACGCGCG 1655 Query 54212 CATCACCGCGATCCGCAACCGCAAGGGGCCGCCGCAGAAGGGGCAGGACATCATCCTGAA 54271 |||| |||||| | || ||||||| ||||| || | |||||| | ||| Sbjct 1656 TATCAAGGCGATCGAGGAACGGGAGGGGCCAGCGCAGCCCGGAGATGACATCCTGCTGTC 1715 Query 54272 CGTGATCGCGGACGGCCGTTTCTCCGCGATCGACATGCGCTTCGTCGA-CCCGACCGCGC 54330 |||||| | |||||||| | |||||||||| |||| | ||||| |||||| | Sbjct 1716 GGTGATCACCGACGGCCGCCACGCCGCGATCGATCTGCGTCTGGTCGACCCCGACAATGG 1775 Query 54331 CGAGCGA-CCCGAGCAGCAAGCTGAACCAGATGATCG---ACGCCGTGATCGCCGACTAC 54386 || ||| ||||| || |||||| ||| | |||||| ||||| | ||| Sbjct 1776 AGA-CGAGCCCGA-CAACAAGCTCAACGACCTGATCGGAAACGCCTT-----CCG----- 1823 Query 54387 CATGCGGCGTCCG--ACTTC---GAGTATTCGACGAACGGC-AAGGTCGACCCGATCAAG 54440 ||| | ||| | || || || | | || | | | | | ||| | || Sbjct 1824 CATCTG--GTCGGAAACGTCACAGAACACTTATCGCAAGCCTGATGGCGATTGCTTTGAG 1881 Query 54441 ------GGCGCGTCGCACATCATCTTTACCGACATCGGGCTCGGCGAGCAGTCGGCGAAG 54494 || || |||| || |||||| |||| || ||| || ||| || || ||| Sbjct 1882 CTGCCCGGTGCCGCGCAGATGATCTTTTCCGATCTC-GGCACGATCAGC-GT-GGAAAAG 1938 Query 54495 AACCGCGG--TTTCGACATGAAGGCGTGGAT-CGAGAAGCGTCTGGTCGACGGCGGCATC 54551 ||| | || | || | | | || ||||| || || | | || || | | ||| || Sbjct 1939 AACAGGGGGTTCTCTGCCT-ACCGC-TGGATCCGCGACGAG-CTTGTGCGCAGGGGCGTC 1995 Query 54552 CCGCGCG-AGCAGATCGCGTTCATGCGCGACAACA---AGGAGCATGCCAAGAAAGAGCG 54607 ||| ||| | | ||||| ||||||| || ||| | ||| |||||| |||| Sbjct 1996 CCG-GCGTCGGAAATCGCCTTCATGCAGGATTACAGATGCGCGCAGGCCAAG---CAGCG 2051 Query 54608 CCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CAT 54664 |||||||| ||| | | ||||| || | ||||||||| ||| ||| Sbjct 2052 CCTGTTCGGTGACGTCAATGCCGGCAAGGTCCGGTTCCTGATCGGCTCGTCGGAAACCAT 2111 Query 54665 GGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTG 54724 || ||||||||||||| ||| ||||||| | | | | || || |||| ||| || Sbjct 2112 GGGCACCGGCGTCAACGCCCAGCTGCGCCTCAAGGCGCTGCATCACCTTGACGTGCCTTG 2171 Query 54725 GTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAA 54784 | | || | |||||||||| ||||| |||||| ||| |||||||| ||| | | Sbjct 2172 GCTGCCCTCGCAAATCGAGCAGCGTGAGGGGCGCATCGGCCGGCAGGGCAATCAGCATGA 2231 Query 54785 GCAGGTGCGCATCCGCGCCTGGGCGAC-GAAGGGCAGCTACGACTCCACCATGTGGGGGA 54843 || | ||| ||||| ||||| ||||| ||| |||| ||||||||||| || Sbjct 2232 CGAGATCGATATCTTCGCCTATGCGACGGAAGGCTCGCT-CGACGCCACCATGTGGCAGA 2290 Query 54844 TGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCGCTCAACGGCGACGACAGCG-TGCGC 54902 |||| |||||||| || ||||||| ||| || ||||||| || || | ||| Sbjct 2291 ACAACGAGCGCAAGGCCCGCTTCATCGCCGCGGCCCTTTCCGGCGAC-ACCTCGATCCGC 2349 Query 54903 TCGCTCGAGGACGTGTCCGAGGCATCGGC------ATTCGACATGGCCGCCGCGCTGGCG 54956 |||||||||| || ||||| ||| |||| ||||||| ||| | ||| Sbjct 2350 AGGCTCGAGGACATGGGCGAGGGCCAGGCCAACCAGTTCGCCATGGCCAAGGCGATCGCG 2409 Query 54957 TCGGGCGACGAGCGCTACATGAAGCTGGCGGGCCTGAAGGCCGACGTCGAGCGGCTGGAG 55016 ||||||||| |||| ||| || |||||| || | ||||| ||| ||||||||| Sbjct 2410 TCGGGCGACCCGCGCCTGATGCAGAAGGCGGGGCTCGAAGCCGAAATCGCCCGGCTGGAG 2469 Query 55017 CGCCTG 55022 |||||| Sbjct 2470 CGCCTG 2475 >seq15910 Length=10648 Score = 120 bits (132), Expect = 1e-22 Identities = 386/583 (66%), Gaps = 27/583 (5%) Strand=Plus/Minus Query 51074 CACGCAGTACGCGCACTACACCAGCGAGGGCGTGATCCGGTCGATCTACGACGGCATGCG 51133 ||||||||||||||| | ||| ||| | | ||||| | |||| ||| ||| Sbjct 1508 CACGCAGTACGCGCATTTCACGCCCGAATTCATCGTCCGGGCCATCTGGTCGGGCTTGCT 1449 Query 51134 CCGCCTGGGCTTCGCCGGCGGAAAGGTGCTCGAGCCGGGCATGGGTATCGGCCTGTTCAA 51193 || || |||| |||||| ||||||||| || ||||| || | || ||||| Sbjct 1448 GCGGCTCGGCTGGCGCGGCGGCCGGGTGCTCGAACCTGGCATCGGCACGGGGCTGTTTCC 1389 Query 51194 GGGGCTGATGCCCGAAAGCATGGCCGCGACCAGCCAGTACACCGGCGTCGAGTACGACCC 51253 | |||||||| || | || | || |||||| ||||||||||||| ||||| Sbjct 1388 CGCCCTGATGCCAGACGACCTGCGCCCGGTCAGCCATGTCACCGGCGTCGAGCTGGACCC 1329 Query 51254 GCTGACCG-GCGCGATCGCGAAGCTGCTGTATCCGCAGAGCAACATCATCGTC---GGCG 51309 | | |||| |||| ||||| ||||| | || | || | ||||||| |||| Sbjct 1328 GGTTACCGCGCGC-ATCGCCCGCCTGCTCCAGCCCC---GCGCCCGCATCGTCAATGGCG 1273 Query 51310 ACTTCACGAAAACCGCGATGCCGCGCGAGTTCTTCGACGCGGCGATCGGCAACCCGCCCT 51369 | ||| | ||||| | ||||| ||| | ||||| |||||||||||| ||||||| Sbjct 1272 ATTTCGCCCGAACCGAGCTGCCG-GCGCAT--TTCGATCTGGCGATCGGCAATCCGCCCT 1216 Query 51370 TCGCGTCCG-TCGTTGTGACCAAT--GACCCCGAGTACAAGAAACAGGGGTTCATGCTTC 51426 | |||| ||| | || | |||| | ||| | || | ||| | Sbjct 1215 T---TTCCGATCGCACGGTCCGTTCGGACCGGGCGTATCGCGGCCTCGGCCTGCGGCTGC 1159 Query 51427 ACGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAGCCGGGCGGCATGCTCGTG---T 51483 | ||||| ||| ||| |||| | |||||||| |||| || ||||| ||||| | | Sbjct 1158 ATGACTATTTCATCGTCAAGGCGATCGACCGGCTGAAACCCGGCGG---GCTCGCGGCTT 1102 Query 51484 TCGTCACCAGCAAGGGCACGATGGATAAGG-CGA-GCGACCGGGCACGCAAGTACCTCGC 51541 |||||||| || || |||||||| |||| ||| | |||| || | || | | | | Sbjct 1101 TCGTCACCTCCAGCGGGACGATGGACAAGGCCGATCCAACCGCGCGGGAAACGATCGC-C 1043 Query 51542 CGACCGCGCCAACCTGATCGGCGCCGTGCGGCTGCCGCAGACCGCGTTCAAAGACAACGC 51601 |||| | ||| | || ||| |||| | || |||||| || | ||| | | | || Sbjct 1042 CGACAG-GCCGATCTTGTCGCCGCCATCCGCCTGCCGGAGGGCAGCTTCCGGGCCGAGGC 984 Query 51602 CGGCACGGAAGTCGTGACCGACGTGCTGTTCCTCCAGAAGCGC 51644 ||||||| | || ||| ||||| | || || ||| ||||||| Sbjct 983 CGGCACGAACGTGGTGGCCGACATCCTCTTTTTCCGGAAGCGC 941 >seq13590 Length=3652 Score = 95.1 bits (104), Expect = 5e-15 Identities = 101/131 (77%), Gaps = 8/131 (6%) Strand=Plus/Plus Query 23681 CTTCGACCAGTCGTGCCCGTTGCGCGTCAGCAGCCGCACGCGCTCGGC----ATCGCGGG 23736 ||||| ||||||| | ||| |||||||||||||| ||||||| | || || ||||| Sbjct 3486 CTTCGTCCAGTCGAGGCCGCTGCGCGTCAGCAGCTTCACGCGCCCCGCCGAGAT-GCGGG 3544 Query 23737 CGACCTGAAGGCGGAACCCATCGTGCTTGAGCTCGTGCAGCCAGTCGGGCCCGGCCGGCG 23796 |||| |||||| | || ||| ||||| ||||||||||||||| |||||| ||||| Sbjct 3545 ---CCTGCAGGCGGTAGCCGTCGAACTTGATCTCGTGCAGCCAGTCCTGCCCGGACGGCG 3601 Query 23797 GTGCGCTGGCG 23807 ||| || || Sbjct 3602 CGGCGGTGACG 3612 >seq12362 Length=960 Score = 87.8 bits (96), Expect = 7e-13 Identities = 117/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 10107 GGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCC---GCCTCGCCGAGATCGTCGA 10163 |||| |||||| |||||||||||| | ||||| | ||||| | || ||| ||| Sbjct 21 GGAAAAGACCGAGTGGCACCGCGTCGTCATCTTCAACGAGGGCCTCTGCAAGGTCGCCGA 80 Query 10164 CGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGCACGCGGAAGTG 10223 ||| ||||||||||||| || |||||| ||||||||| | | || || |||| Sbjct 81 GCAGTTCCTGCGCAAGGGCTCGAAGGTCTATGTCGAGGGCCAGCTGCAGACCCGCGAGTG 140 Query 10224 GCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGT 10265 | | || | ||||||| | |||||| |||||||| |||| Sbjct 141 GGAAGACCAGAGCGGCCAGAAGCGCTACTCGACCGAGGTCGT 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197750691661050