Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq8540 190 3e-43 seq11271 91.5 2e-13 seq8859 86.0 9e-12 >seq8540 Length=3320 Score = 190 bits (210), Expect = 3e-43 Identities = 440/654 (67%), Gaps = 18/654 (3%) Strand=Plus/Plus Query 86164 GCCGGTCTTGGGCGAGCGCAGGGCGAACTCGGTGTCGTCGCGCACCGCGATCATGAACTC 86223 |||| ||| ||||| ||| | | |||| | ||||||||||||| |||||| | Sbjct 74 GCCGTCCTTCGGCGACGTCAGTTCCCATTCGGCGCCGTCGCGCACCGCTTCCATGAAGGC 133 Query 86224 GTCGGTGACGTTGACGGCGTTGTGCAGGTTGGTGATCTTGCGGTTCTGGTCGCCGCCAGT 86283 |||| || ||| ||| ||||||||| ||||||||| |||||| || Sbjct 134 ATCGGGGATCAGCACGCCGTGGTGCAGGTTCAGCGCCTTGCGGTTGAAATCGCCGG-AG- 191 Query 86284 AGGCTTGCGGGCCGTGATGAACTCGCGGATTTCCGGGTGGCTGATGTCCAGATAGACGGC 86343 ||||| | | | || |||||| ||| || ||||| |||||| |||||| ||| Sbjct 192 -GGCTTCCTGATCTCGAGGAACTCCTCGATCTCGGGGTGCGAGATGTCGAGATAGCAGGC 250 Query 86344 GTTGGAGCCCCGGCGCGTGCCGCCTTGGCTGACGGCGAGAATCAGGCGATCGTCCACCGC 86403 | ||||| || ||| ||| ||||||| || || |||||| || ||| Sbjct 251 GGCCGAGCCGCGCCGCAGCGAGCCCTGGCTGATCGCCAGCGTCAGGCTGTCCATCACGCG 310 Query 86404 CATGAACGGGATCACGCCGGTCGACTGCGAACCCTTCGAGGTCTTC----TCGCCCAGGC 86459 | ||| ||||| | ||| | | || || | |||| | | ||||| | | Sbjct 311 GACGAAGGGGATGATCCCGCTGGTCTTG----CCGTTGAGGCCGACCGGCTCGCCGATCC 366 Query 86460 CGCGCAGGGCGCCGTAATAGGAGCCGATGCCGCCGCCCATCGACGAGAGCCAGATGACCT 86519 |||||| ||| |||||| |||||||||||||||| | || | |||||||| | || Sbjct 367 CGCGCACATTGCCCCAATAGGTGCCGATGCCGCCGCCCTTGGAGGCGAGCCAGACGTTCT 426 Query 86520 CGTCATAG-TGCTCGGAGATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAG 86578 ||| || ||| || ||| ||| ||||||| | || | |||| |||| ||| Sbjct 427 CGTTCCAGGTGC-CGACGATGCCTTCGAGGCTGTCGGACACCGAGTTGAGATAGCACGAG 485 Query 86579 ATCGGCAGGCCGCGCGCGGACCCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAG 86638 ||||| || || || || ||||||||||| |||| || || ||| ||||||||| Sbjct 486 ATCGGAAGACCCCGGTTGGTGCCGCCGTTCGAAAGCACCGGGGTCGCGGGCATGAACCAC 545 Query 86639 AGGTTCGAGACATAGTCGTAGAGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCA 86698 |||||||||| |||||||||||||||||| ||||| | |||| || || |||| | Sbjct 546 AGGTTCGAGATGTAGTCGTAGAGCCGCTGGGCGTGCGCCTCGTCGTCGGCATAGGCATC- 604 Query 86699 CTCG-CGCGCGCGAAGGCCTCCTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACG 86757 | || ||||||||||| |||| | || | || || ||||| || ||||| || Sbjct 605 CGCGACGCGCGCGAAGAGATCCT---GATAGGTCTCGCCGGGCAGGAGGTAGCGGTCGGT 661 Query 86758 GAGGGTCTGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCGGGTGAGATCGATCTT 86811 ||||| | | ||| ||| ||| ||||||||| | | |||| |||| Sbjct 662 CAGGGTTTCCTTGCCGAACTCGGTGAGATTGGCGTCGCGCGCGGCATCGGTCTT 715 >seq11271 Length=669 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/183 (73%), Gaps = 10/183 (5%) Strand=Plus/Minus Query 82986 TACTCCGTCGAGCGCTGCTCGAAGAAGTTGGTGTGGGTCGGGGC-GTTCATGATCCAGTC 83044 ||||| |||||||| |||||||||||||| ||| ||| || | ||| ||| | | Sbjct 599 TACTCGGTCGAGCGGGCCTCGAAGAAGTTGGCGTGC-TCGACGCCGCTCAGCATCGACTG 541 Query 83045 GAGCCAGTCGAACGGATTGTCCTTGACGCCGTAA---TTGGGCTTCAAGCC-CAGTTGCA 83100 |||||| | ||| || ||||| || ||||| | |||| ||| ||| || Sbjct 540 CAGCCAGGGCAGCGGGTTTTCCTTCACCCCGTACAGCTCGGGC----AGCTTCAGCTGGC 485 Query 83101 GCAGCCGGCGGTCGGCGATGTAGCGGATGTACTGCTTGGTGTCCTCGGGCGTGACGCCCT 83160 ||||||| | ||||||||| |||||||||| |||| ||||||||||||| | ||||| Sbjct 484 GCAGCCGCCAGTCGGCGATAAAGCGGATGTAGGCCTTGATGTCCTCGGGCGTCATGCCCT 425 Query 83161 CGA 83163 || Sbjct 424 GGA 422 >seq8859 Length=40362 Score = 86.0 bits (94), Expect = 9e-12 Identities = 185/272 (68%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 145506 TGGTAGAAGCGCTCGGGCAGGCCGTCGATCTGCTCGACGTTGAACACCAGATAGGACTTC 145565 ||||| || | ||||| || ||||||||||| ||| ||||| || || | || Sbjct 31347 TGGTAATAGTGATCGGGAAGCCCGTCGATCTGATCGCAATTGAAGACGGTGTACGTTTTG 31406 Query 145566 AGGAACGGGATCATC-CGCTCGACGTCCTTGCCGTTGGCGTCCTTCTCGGTCTTCTTGAA 145624 |||||||| || ||| ||||| | |||| ||| | |||||| ||||||| ||| |||| Sbjct 31407 AGGAACGGAAT-ATCGCGCTCCAATTCCTCGCCCTGCGCGTCCGTCTCGGTTTTCGTGAA 31465 Query 145625 CTTCGAGGCGTAGACGATCAGTTCGGACTTCTCGCCCTTGCGGACCTGACCACCCA--GG 145682 | || ||||||| | || | |||||||||||||| || | || | | Sbjct 31466 CCGGCTCGCATAGACGACCGTCGCGCCGGTTTCGCCCTTGCGGACTTGTGCGCCGATCTG 31525 Query 145683 TCCCTGGCTTGGTTGTAGGTCATCCAGGTCGGGTTGGTGTAGCCGCGCTCCTGGGCGGCG 145742 | || || || |||||||||||| ||| ||| | |||||| || || | Sbjct 31526 TGCC--GCCTGCCGATAGGTCATCCAGAGCGGTGCCGTGAACCCGCGCGCCAGGCTCTCC 31583 Query 145743 GCCCACAGGAGGACCACGTTGATCCCGGTGTA 145774 | |||||| | | |||||||| |||||||| Sbjct 31584 GACCACAGCAACAGGACGTTGATGCCGGTGTA 31615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690004030170000