Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq14742 518 4e-142 >seq14742 Length=52551 Score = 518 bits (574), Expect = 4e-142 Identities = 730/1017 (72%), Gaps = 6/1017 (1%) Strand=Plus/Plus Query 164618 AGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCT 164677 |||||||||| | | ||| || ||||| ||||| || ||||| || | || ||| | Sbjct 37773 AGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCAGGTCTTCTTCTTTT 37832 Query 164678 TCCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTG 164737 || ||||||| | || |||| |||||| ||||||| ||| ||||||| || || Sbjct 37833 CCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACTTTTGTAACATCATG 37892 Query 164738 GTACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGT 164797 |||||| |||||| | |||||||| ||| | |||||| |||||| | ||||||||||| Sbjct 37893 GTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTCTTAACAGCAGCTGT 37952 Query 164798 CTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT-TGGGGTCCTGAGTCTC 164856 || || ||||| | ||||| ||| ||| || || | ||| ||||| ||||| | | Sbjct 37953 TTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATGGGGACCTGAAGCAC 38011 Query 164857 -AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 164915 ||| || ||| | || ||||| ||| | || || ||||||| || | ||| | || Sbjct 38012 AAGGTGACTTTAC-TCGTTGGTGTCAATTAGGTGGTCTATGGACATTTATTGCTTTACAT 38070 Query 164916 GGTGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACGTCTCA-TTGG 164974 || | |||| ||||||| || ||| | || || ||||| | || ||| ||| || Sbjct 38071 GGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTGCTCGT-TCAGTTAA 38129 Query 164975 TATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTT 165034 | | ||||| |||||||||||||| ||||| | |||||| | |||||||| || || Sbjct 38130 TTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTTTTTGTTTCAGTTTT 38189 Query 165035 CCTTATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGC 165094 | | || |||||| | || || || | |||||||| ||||| ||||| || ||||| Sbjct 38190 CTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGTTTTGGTGTAGCAGC 38249 Query 165095 AATCTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCA 165154 || || | ||| | || || | ||||| ||||| |||||||| | ||||| ||||| Sbjct 38250 TATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACTTTAAACCCATTCCA 38309 Query 165155 TATGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCAC 165214 ||||||||||| |||||| | || |||| || | ||| ||||||||| || | || Sbjct 38310 CATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCTATTCACGGTGCTAC 38369 Query 165215 AGTTGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTC 165274 |||||||| ||||||| || ||||| || || || || || || ||| | | Sbjct 38370 TGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTCCGTGCATTTAACCC 38429 Query 165275 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 165334 ||||| | ||||| ||||| || ||||| || || ||||| |||||||| || || || Sbjct 38430 AACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTCTGGTCTCAAATTTT 38489 Query 165335 CGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 165394 || |||| || || || || || |||||||| || |||||| | |||| |||||| | Sbjct 38490 TGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTTCTTGTTCCTGTTGT 38549 Query 165395 GGGTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGA 165454 |||||||||| || ||||||| | |||| | ||| | || | |||||||| || Sbjct 38550 AGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAATTTACGTGCTTATGA 38609 Query 165455 TTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAA 165514 ||||| || || || | ||||| || ||||| ||||| || || |||||||| || Sbjct 38610 CTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAAACTTTCTACACAAA 38669 Query 165515 AAACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGA 165574 ||| || | || |||||||| | ||||||||| |||| | || ||||| ||||| Sbjct 38670 AAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAAGACCAACCACATGA 38729 Query 165575 AAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATAAAGATT 165631 | || | ||||| ||||||||||| ||| | || || || || |||| || ||| Sbjct 38730 ACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTATAATCAATATT 38786 Score = 237 bits (262), Expect = 2e-57 Identities = 285/382 (75%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 162883 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 162942 |||| | ||| || || ||| | ||| ||| | ||||| | || ||||||||||| Sbjct 12280 TGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTC 12221 Query 162943 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGT 163001 || || | ||||| || || | || |||| ||| ||||| |||||| |||| ||| | Sbjct 12220 GGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCAT 12162 Query 163002 CGCTGCTCCCCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTA 163061 |||||| || || || || || || || || |||||||| || |||||||| | | || Sbjct 12161 CGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATA 12102 Query 163062 TGGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTT 163121 || |||||||||||||||||||| |||||||| | || ||||| |||||| | || || Sbjct 12101 CGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTT 12042 Query 163122 CTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCA 163181 ||| || || |||||||| |||| | ||||||||| | || ||||||||||||| ||| Sbjct 12041 CTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCA 11982 Query 163182 ACTCGTAGTCTTTCACTTCCTTATCGGCATCTA-TGCATATATGGGACGTGAATGGGAAC 163240 | | | || | |||||| | | || || | ||| || ||||| |||||||||||| Sbjct 11981 ATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAAT 11923 Query 163241 TTTCATATCGCTTAGGTATGCG 163262 | || || || ||||||||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 235 bits (260), Expect = 6e-57 Identities = 261/348 (75%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 163396 GTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGT 163455 || |||||||| ||||||||||| || |||||||| ||||| ||||| || || |||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 163456 GTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTC 163515 || || ||||| ||| | ||||| |||||||| || | || || || || | || Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 163516 CGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAG 163575 ||||| || ||||||| || || ||| | || ||||| || |||||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 163576 ACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCA 163635 ||||||||||| || || |||||||| ||||| || ||||| ||||||||||| || || Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 163636 TTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGG 163695 ||||||||| | | ||||||||| | || || ||||| || || || || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 163696 TTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTC 163743 || ||||| | || | || |||||||||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 163258 ATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTC 163317 ||||| || ||||| |||||| |||||||| || |||||||| || | ||||| ||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 163318 CTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGC 163377 | |||||||| |||| ||||||||||||||||| | ||||| | || |||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 163378 ACATTCAACTACATG 163392 || ||||||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 163742 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACG 163801 ||||||||||||| || | |||| ||| |||||||| | ||||||||||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 163802 TGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 163861 | | ||||| ||| | ||||||||||||||||| |||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 163862 CA 163863 || Sbjct 8165 CA 8164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563095374053000