Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq14319 156 9e-34 seq8309 93.3 9e-15 >seq14319 Length=508 Score = 156 bits (172), Expect = 9e-34 Identities = 333/483 (69%), Gaps = 16/483 (3%) Strand=Plus/Minus Query 13379 CCCAGCTGTCCACCATGCACGCCTGCAGC-TCGCTGAGCGGGAACACGGAC-GCGAGATC 13436 ||||| || | |||||| | ||||||| |||| ||||||||||| ||| ||| ||| Sbjct 505 CCCAGGAATCGATCATGCAGGGCTGCAGCATCGCC-AGCGGGAACACCGACTGCGC-ATC 448 Query 13437 GTCCACGAACTCACACATCAGCAGGTTCTGGTATTCGTCCGGGCTGTACTCCATGCGCAG 13496 ||| | ||||| |||||||||||||| | | |||||||| | ||||||| |||||| Sbjct 447 GTCGATGAACTGGCACATCAGCAGGTTGGCGAACTCGTCCGGCCCGTACTCCTGGCGCAG 388 Query 13497 CTGGTCGAGGTCGAACAGGTTACAGCCGCCGCGCACCGCATCCTCCACGGTGACGATCTG 13556 || ||||| |||||| |||| || ||||| | |||||||||| | || | | || Sbjct 387 CTCGTCGATGTCGAAGAGGTCGCAACCGCCCGCCTCCGCATCCTCGATCGTCAGCACATG 328 Query 13557 GCGGTACTGCCCGTCAGGGCAGAGCAGGCCGCGC-GCAAGGTTGCTGTGGGTCAGGT-TA 13614 ||| | | ||| || | |||| ||| | || | || |||| | | || | Sbjct 327 CCGGAAGATCTTGTCGGGCCCGAGCGCCCCGTTCTTCAGCGCCGC-GTGGCTGACGTCGA 269 Query 13615 ATATCCAC--CTTGTCCGCTTTGGCACGGCCCCGGTTAAACAGCGCACCGGACCAGAACG 13672 | | || | || ||| ||| ||| || | |||||| | | |||| |||||| Sbjct 268 AGACCCGCTTCTCGTC--CTTCGGC-CGCCGCCGGTTCCAGTTGTCGCCGGTCCAGAAGC 212 Query 13673 GATAAGCACTGTGGGTCAGGCTGGAGGGCGTGGAAAAATAGGTTTGTCGCCATTTTTTGT 13732 ||| || ||| ||| |||| ||||| || | |||||||| ||||| || |||| Sbjct 211 CATAGGCCTCGTGCATCACGCTGCTGGGCGACGACAGATAGGTTTTCCGCCACTTCTTGT 152 Query 13733 GAATGGCCATACCGGAAGCCACTTTGCGCAGTTCCTGGAATTTTGGTA--TCCAGAAATA 13790 | |||||| || || || || ||| || | ||| || | ||||||| | Sbjct 151 GGGCGGCCATCATCGAGGCGACCTTATTCAGGTCGTTGAA--CCGGAAGGTCCAGAAGAA 94 Query 13791 TTCATCCAGGTACAGATTACCGTGATAGCTCTGCGCCGTGCGGGCGTTGGTGCCGAGAAA 13850 || || | ||| | ||| |||||||||| ||||||||| |||||||| ||||| || || Sbjct 93 CTCGTCGAAGTAGAAATTGCCGTGATAGCCCTGCGCCGTCCGGGCGTTCGTGCCCAGGAA 34 Query 13851 GTA 13853 ||| Sbjct 33 GTA 31 >seq8309 Length=800 Score = 93.3 bits (102), Expect = 9e-15 Identities = 138/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 27720 TCGGCCTGCGTGCCAAAATCGACGAGCAGATCGGCTGGCATAAAACCCTGTCCAATGTGG 27779 |||||||||| ||||| |||||||| | |||||||||| || || | ||||| || | Sbjct 381 TCGGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCG 440 Query 27780 GTGTGAACGGTGTCACCGGCATTTCC-GCT-GATGTGTTCTGGGATCTGCAGGACCCGGC 27837 || ||||| ||| |||| | || || ||| | || | ||||||||||| | Sbjct 441 CGGTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAG--CTTCGCCCTGCAGGACCCCTC 498 Query 27838 AACCGATGCGGGACTGCTGAACAAAAATGACGTCACCACATTGATCCGCAAAGACGGCTT 27897 ||||| || || | |||||| | ||||||| | |||||||| | ||||||| Sbjct 499 GACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGCTT 558 Query 27898 CCGCTTCTGGGG 27909 |||||||||||| Sbjct 559 CCGCTTCTGGGG 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109031788592550