Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3654 118 2e-21 seq9159 93.3 8e-14 seq2367 86.0 1e-11 >seq3654 Length=3311 Score = 118 bits (130), Expect = 2e-21 Identities = 125/162 (77%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 213469 GCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTG 213528 |||||||| || ||||| ||| |||| |||||| || || ||| | | | | Sbjct 900 GCACAAACCGTGGTAGGGCAATGGATGCCAAGTTGCACACCGCAGTCTCATCTGGGCTGG 959 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 ||||||||| ||||| ||||||||||||||||| ||| |||||||||||||| ||| Sbjct 960 TGTACTCCACAATCTCAGTGCACAGGTTGCTGCACTTGATTGTGCCCAGGTTCTGCTGG- 1018 Query 213589 TTGACTTTGC-GTTGGCAGAATCCTTGTAGAGCATGTAGGGG 213629 ||| ||||| |||| || ||||||||| |||||||||||| Sbjct 1019 TTGCTTTTGCGGTTGCAAGCATCCTTGTACAGCATGTAGGGG 1060 Score = 107 bits (118), Expect = 4e-18 Identities = 178/249 (71%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGA-CAGGATGCGGGA 213782 ||| |||| |||||| || | ||||||||| ||| |||| || ||| | || ||| Sbjct 1330 GTACAGCTTGTTGAACTCCTCTCCCCAGACCTCTG-CCAGGCCTGGAGCCTCATTGGGG- 1387 Query 213783 CACATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCA 213841 || | || |||||||| ||| | ||| |||| || ||||||||| || || ||| Sbjct 1388 CAGAACAGACTCCAGTCTTGGTCCTGCTCC-ACTCGCTTCATGAACAGATCATTGATCCA 1446 Query 213842 CAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATC 213901 || | |||||| || | || | |||| ||| || ||| |||||||| || Sbjct 1447 GAGGCCATAGAACAGATCACGGGCACGGTTCTCCTCCTTGCCGTGGTTCTTGCGCAGGTC 1506 Query 213902 TAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCT 213961 || |||||||||||||| |||||||| ||||| || |||||||| ||||| ||| | Sbjct 1507 AAGGAAGTCAAAGATGTCTGCGTGCCAGGGCTCAATATAGATGGCGAAGGCACCCTTGCG 1566 Query 213962 CTTGCCGCC 213970 |||||| || Sbjct 1567 CTTGCCACC 1575 Score = 105 bits (116), Expect = 1e-17 Identities = 220/325 (68%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 213119 CCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGG 213178 ||||||||| ||||| | || ||||| || |||||||||| || | |||| Sbjct 212 CCACATGTCGTGCTGCAGTACACCCTTGCTGACTGGGCTGCCCTCATAGGTCTCATAGGT 271 Query 213179 GCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAA 213238 |||||||||||||||| |||| | ||| ||||| | |||||||||||| ||||| Sbjct 272 ACCATGCTCCTTGGCCAATGTGCAGCTTGTCTGGAGGGCTGAGTAGTAGATGGTCTCAAA 331 Query 213239 TATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAA 213298 || || |||||||||| ||||||||| ||||||| || | |||| Sbjct 332 GATGTCTCTGTTGAGCTCTGCTGCCTCTGGGCTGTCAAAGGGCAAACCCAGCAGCAGGAA 391 Query 213299 CACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGA 213358 |||||||| |||||||| || | || || || ||||| | || ||| | || Sbjct 392 GGTGTCAGCCAGACCCTGGACACCCAGACCAATAGGCCTGTGGCGCACGTT-GCTGCGGC 450 Query 213359 GCACT-CCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCA 213417 | || ||| ||||| ||||| ||||||||| ||||||||| ||||| | Sbjct 451 GTGCTGTCTCTGTTGGGTAGTAGTTGACGTCGATGATGCGGTTGAGGTTTGCAGTGGCGA 510 Query 213418 CTTTGGTGACATGGGCCAGGTACTC 213442 | ||| || | ||||| | ||| Sbjct 511 CACGGGTAACCTCTGCCAGCTTCTC 535 >seq9159 Length=2836 Score = 93.3 bits (102), Expect = 8e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186 || |||| | ||||| | ||||| || || || | |||||||||| | ||| |||| Sbjct 1245 CAAGCAGCCGAAGTCTGTATGCAATCCCTCATCTCTGCTGATGAGCTCATTGCTGAAGGT 1186 Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246 ||| |||||||| | || | || ||||||||||| || || ||| ||| ||||| Sbjct 1185 GAGGCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGCACAGAAGCTGCCTGAGAA 1126 Query 48247 GAAGATGCCCTCCACTGCCGC 48267 ||||||||||||||| || || Sbjct 1125 GAAGATGCCCTCCACAGCAGC 1105 >seq2367 Length=7310 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 212900 CAGGTGAGGGTTGACTATCTG-GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTG 212958 |||||| ||||||| | ||| ||| || || || | ||| | | | || | ||| | Sbjct 363 CAGGTGCTGGTTGACAA-CTGTGAACTCTCCAGACAACACACGGCGCACATAGATGTTGG 305 Query 212959 AAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCA 213018 | ||||||||||| | || ||||||||| ||||| ||||| |||||||||||||||| Sbjct 304 ATGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCTGGCTGTGGGCA 245 Query 213019 TGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCT 213054 | || || || || || ||| | || ||||||| Sbjct 244 TCGGGGCAACAAGCAGTGAGTTGCGGACACCGTGCT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931343873504000