Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq2471 176 1e-39 >seq2471 Length=3256 Score = 176 bits (194), Expect = 1e-39 Identities = 508/771 (66%), Gaps = 18/771 (2%) Strand=Plus/Minus Query 45443 CAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATCGGACG 45502 || || || ||| |||||| || | | || | |||||| ||| || ||||| Sbjct 2970 CAGTACCTCGACCTGCTGCGCGAGCTGATCGACACCGGCGTCGAGCGGCCTGACCGGACC 2911 Query 45503 GGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTC 45562 || || ||||| ||| |||||||||| ||||||||| | | | ||||| ||| Sbjct 2910 GGCACGGGCACGCGATCGCTGTTCGGCCGCACGCTGCGCTTCGATCTCCGCGACGGCTTC 2851 Query 45563 CCGCTCGTGACGACGAAAAAGTTGCATAT----CCGCTCGATCATTTATGAACTGCTCTG 45618 ||||| | |||||||| | | | | | | || || | |||||| |||| Sbjct 2850 CCGCTGCTCACGACGAAGCGGAT-CTTCTGGCGCGGCGCGGCGACG---GAACTGATCTG 2795 Query 45619 GTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGA 45678 ||| | | ||| || || | |||||| | | ||||| || || ||||| ||||| Sbjct 2794 GTTCCTGAGCGGCTCGACCAACATCCGCTATCTCAACGAGAACGGCGTCACGATCTGGGA 2735 Query 45679 CGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTG 45738 |||||||||||| || |||||| |||||||| |||||||| ||| ||||| | || Sbjct 2734 CGAGTGGGCCGACGAGGCCGGCGAACTCGGCCCGGTCTACGGCAAGCAGTGGCGCGCCTG 2675 Query 45739 GAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCG 45798 | | || || |||||| | |||||| | || | || | | || ||| Sbjct 2674 GGAGGGTGCCGACGGGGTGGTGCACGACCAGCTCGCCGATCTCGTGACGGCGATCCGCAC 2615 Query 45799 CAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAAT 45858 |||||| | |||||||||| |||| | | | |||||||| | || | || || Sbjct 2614 CAACCCCACCTCGCGGCGGCTGCTGTTCACGGGCTGGAACGTCGGCGAGCTCGGCCGCAT 2555 Query 45859 GAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATG 45918 | | |||| || || || ||| |||| |||||||| | |||||| | || | Sbjct 2554 GGCGCTGCCGCCCTGCCACATGACCTACCAGTACTACGTCGCCGAGGGCCGGCT--CA-G 2498 Query 45919 CATGTGGC---AACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCT-A 45974 | | || | ||||| || | ||| || || || || | | |||||||| | Sbjct 2497 CGGGGCGCTGTACCAGCGCTCGGCCGACACCTTCCTCGGCCTCGGCTGGAACATCGCCGA 2438 Query 45975 GCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCA 46034 | | |||||| ||| || ||| | || || || ||| ||||| |||||||||||| Sbjct 2437 GGCA-GCGCTGCTGATCCACATGCTGGCGCAGCAGACCGATCTCGACGTCGGCGAACTCG 2379 Query 46035 TTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGC 46094 | | ||||| |||| ||| | ||| ||||| | || || ||||| ||||||| Sbjct 2378 TCTGGTTCGGCGCCGACACGCATCTCTACGTCAATCACATCGAGCAGGCGAAGCTGCAGC 2319 Query 46095 TGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCC-GCCGTCTATC 46153 | |||||||||||| ||| | ||| || |||| || ||||| |||| | || Sbjct 2318 TCGAGCGCGAGCCGCGGCCGTTCCCGCGCCTGTCGATCCGTCGCAAGCCGGCCGAC-CTC 2260 Query 46154 TTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCG 46204 || ||| | |||||||| || || | |||||||| || ||||||||| Sbjct 2259 TTCAGCTACGCCTACGAGGACTTCGAGCTCGTCGGCTACGATCCGCACCCG 2209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157720005934650