Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq8309 161 2e-35 seq14319 91.5 3e-14 >seq8309 Length=800 Score = 161 bits (178), Expect = 2e-35 Identities = 254/361 (70%), Gaps = 2/361 (1%) Strand=Plus/Minus Query 26003 CAGCTCGCGGAATTTGGCATTGATGCCCGCGATAATGTCGCGCACCAGTACCGGCGTCAG 26062 ||||| |||||| ||||| |||||| | |||| ||||||||| |||| |||||||| Sbjct 742 CAGCTGGCGGAACTTGGCGTTGATGGTCTCGATGATGTCGCGCGCCAGGCTGGGCGTCAG 683 Query 26063 CGGCTTGTCGTTGGCCCACAT-ATGCGCCTCGGCCATCGTGTCGGCAATCACCTGCGCCG 26121 |||||||||| |||||||| |||| ||||||| || ||||| | | | || | Sbjct 682 CGGCTTGTCGACCGCCCACATCATGC-CCTCGGCGATGGTGTCCTTGAGGATGTCGGCGG 624 Query 26122 TGCGGGTGTAGTTTTCAAACGCAAACAGCGGATCGTCGCTACAGGTGCGGTTGCCCCAGA 26181 |||||| | | |||| ||| || ||| ||||| ||||| |||||||||||| Sbjct 623 TGCGGGCGGCGCTTTCGAACTGGAAGGCCGGCTCGTCAGAGCAGGTCTGGTTGCCCCAGA 564 Query 26182 AGCGGAAGCCATCTTTACGGATCAGGGTGGTAACGCATGCCTCGTTGAGCAGGTCGGCGT 26241 |||||||||| | | |||||||| | ||| |||| || |||| || | | |||||| Sbjct 563 AGCGGAAGCCGTTCTGGCGGATCAGCGCGGTGACGCCGGCGGCGTTCAGGACGCCGGCGT 504 Query 26242 CGGTGCCGGTCTGCTGCAAATCCCAGAAGACCGAGGCGGAAATGCCGGTCACACCGTTAA 26301 |||| || | ||||| | || || | | || | |||| || ||||| | Sbjct 503 CGGTCGAGGGGTCCTGCAGGGCGAAGCTGATCTTGCGGGTCAGGCCGACGACGCCGTTGA 444 Query 26302 CGCCAACGTTGGACAGGGTTTTGTGCCAGCCGGTGTCGGTGTCGATTTTTGCCCGCAGGC 26361 | | |||||||| | || |||||||||||| || ||||| || || ||||||| Sbjct 443 CCGCGACGTTGGAGATCGTCTTGTGCCAGCCGACTTCCTCGTCGAGCTTGGCGCGCAGGC 384 Query 26362 C 26362 | Sbjct 383 C 383 >seq14319 Length=508 Score = 91.5 bits (100), Expect = 3e-14 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 11472 TGACGGTTGAGGATGCGCTGACCGGCGGCTGTAACCTGTTTGACCTCGACCAGCTCCAGC 11531 ||||| | ||||||||| | | ||||| || |||| || ||| ||||| |||| | | Sbjct 335 TGACGATCGAGGATGCGGAGGCGGGCGGTTGCGACCTCTTCGACATCGACGAGCTGCGCC 394 Query 11532 TGGAATACAGCCCGTCGGAATACCAGAACCTGCTGATGTGTGAGTTTGTGGACGATGAGG 11591 ||| ||| | ||| || | | |||||||||||||| |||| | ||||||| | Sbjct 395 AGGAGTACGGGCCGGACGAGTTCGCCAACCTGCTGATGTGCCAGTTCATCGACGATGCGC 454 Query 11592 CGAGCGTGTTCCCGTTCGCCGAGCTGCAGACCTGCATGATCGA 11634 | ||||||||| | || ||||||| ||||||||||||| Sbjct 455 AGTCGGTGTTCCCGCTGGCGATGCTGCAGCCCTGCATGATCGA 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94464995744700