Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq14742 524 1e-143 >seq14742 Length=52551 Score = 524 bits (580), Expect = 1e-143 Identities = 727/1008 (72%), Gaps = 14/1008 (1%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 ||||| || || | || ||||| |||||||| ||||||| |||||| ||||| || Sbjct 38774 AGAGCATTACCACGAGGTAATACTTCTTCAGGGAATACAAGACGTTCATGTGGTTGGTCT 38715 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | ||||||||| || | || || ||||||||||| || Sbjct 38714 TGCGCAGCCATCCAAGCACGGATACCTTCATTTAAAATAATATTTTTTGTGTAGAAAGTT 38655 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 ||||| || ||||| || ||||| | || ||||| || || |||||||||||||| | Sbjct 38654 TCGAATTCCGGATCCTCAGCTGCACGAATTTCTTGTGAAACGAAGTCATAAGCACGTAAA 38595 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || | ||| | |||| | ||| || | |||| ||||| | ||||||||||| Sbjct 38594 TTTAAAGCTAACCCAACTACACCAATAGCTGACATCCAAAGACCTACAACAGGAACAAGA 38535 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 ||||| ||||| || | ||| | ||||| || |||| ||||| |||||||||||| Sbjct 38534 AGCATGAAGAAGTGAAGCCAACGTTTATTTGAGAAAGCAACCCCAAAAATTTGAGACCAG 38475 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 |||||||| ||||| |||||||| ||||| ||||| ||||||| | | ||||| | Sbjct 38474 AAACGGTTCGCTGTTACCATTGAGTAAGTTTCTTCAGCTTGTGTTGGGTTAAATGCACGG 38415 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || ||||| || |||||||||||| | | ||||| || ||||| ||||||| || Sbjct 38414 AATGTGTTAGCACCGTCACCATCTTCAAATAATGTGTTTTCAACAGTAGCACCGTGAATA 38355 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | | || || |||| | | |||||| ||||||||||| ||||||||||| | Sbjct 38354 GCACATAATAGAGCAGCTCCTAAAACACCTGCTACACCCATCATGTGGAATGGGTTTAAA 38295 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||||||||||||||| || | || | | ||| | || || ||||| |||||||| Sbjct 38294 GTCCAGTTATGGAAGCCTTGGAAAAATAAAATGAAACGGAAAATAGCTGCTACACCAAAA 38235 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGA-GAAACACACTGA--CA 102306 || ||||| ||||| | || ||||| | || || || | |||| ||||| || Sbjct 38234 CTAGGAGCAAAAAACCAGCCAGATTGTCCTAATGGGTAAATTAAGAAA---ACTGAAACA 38178 Query 102307 AAAACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACG--AATTCCAATTAACC 102364 ||||| | |||||| | ||||| |||||||||||||| ||||| |||| || | | | Sbjct 38177 AAAACTGAAATAGGCGCCGAGAAAGCAATAGCATTGTATGGACGTAAATT--AACTGAAC 38120 Query 102365 TAGCCAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCA 102424 ||| | || |||||||| | ||| || ||||| | | || | || || | ||| | Sbjct 38119 GAGCAATTTCAAATTGACGTAACATAAATCCAATTAAACCGAAAGATCCATGTAAAGCAA 38060 Query 102425 CAAAAGCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAA-TCTCCTTGAGCTTCAGGA 102483 ||| | ||| || || || | ||| ||| | || ||| || ||||| |||||||| Sbjct 38059 TAAATGTCCATAGACCACCTAATTGACACCAAC-GAGTAAAGTCACCTTGTGCTTCAGGT 38001 Query 102484 CCCCA-AAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGT 102542 ||||| ||| | || || ||| ||| ||||| || ||||| ||||| ||||| ||||| Sbjct 38000 CCCCATAAGAATAATAA-AGAGTGAGCCATACTGTTTGCAGGAGTTGAAACAGCTGCTGT 37942 Query 102543 AAGGAAATTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGC 102602 | ||| ||| |||||| | || ||| || | || || || ||||| || || | Sbjct 37941 TAAGAAGTTACAACCTTCTAAATATGAAGAAGCTAAACCATGTGTGTACCATGATGTTAC 37882 Query 102603 AAACGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAG 102662 ||| || || ||||||| ||| || |||| ||| | ||||||| || |||||||| || Sbjct 37881 AAAAGTTGTACCAGTAAACCAACCTCCAAGTGCAAAATAAGCACAAGGGAAAAGAAGAAG 37822 Query 102663 TCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATC 102710 || |||||||| ||||| ||||| || ||| | | ||||||||| Sbjct 37821 ACCTGACCAACCTACAAATACAAAACGGTCTTGACGTAACCAGTCATC 37774 Score = 253 bits (280), Expect = 3e-62 Identities = 267/346 (77%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 103787 CGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATATATGCAT-AGATGCCAAT 103845 ||||| || | |||||| || |||||||| ||||| ||||| || ||| | || || | Sbjct 11901 CGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGTA-GCAGCAAATACCTAA 11959 Query 103846 GAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAGCCACTCATCAAGAGA 103905 || ||||||| | || | | |||| ||||||||||||| || | ||||||||| | ||| Sbjct 11960 GAAGAAGTGGCAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCTAAAGA 12019 Query 103906 TGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAGGAGGGAACAACTGC 103965 || ||||||||||| || ||||| || | |||||| ||||| || | |||||||| || Sbjct 12020 TGAAGCTTCCCAAATTGGGTAGAAATGTAAACCAATAGCGTTTGATGTAGGAACAACAGC 12079 Query 103966 ACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGTTCACGAATGCCGTC 104025 |||||||||||||||||| ||||| | | |||||||| || || |||||||| || || Sbjct 12080 ACCAGAGATGATGTTGTTTCCGTATAATAATGAACCAGAAACTGGCTCACGAATACCATC 12139 Query 104026 GATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAGATGGTTGCCGCCAACA 104084 |||||| || |||||||| || | |||||| | |||||| |||| || || | || | Sbjct 12140 GATATCAACTGGAGGTGCAGCGATGAAAGCGATGATGAATACAGA-AGTAGCTGTTAATA 12198 Query 104085 GAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGTT 104130 || |||||||| | |||||||||||||| | || | |||||| Sbjct 12199 ATGTAGGGATCATGATAACACCGAACCAACCGATGTATAAACGGTT 12244 Score = 230 bits (254), Expect = 3e-55 Identities = 254/348 (73%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 103306 GAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGAACCAGATACCCAC 103365 ||||||||| | |||||| ||||| || || ||| | || |||||||| ||||| || Sbjct 8934 GAATCCGTTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAATACCAAC 8993 Query 103366 TACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTGAATGATGCGTATTG 103425 |||||| | ||||||||||| || |||||||| Sbjct 8994 TACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAAAGAAGCGTATTG 9053 Query 103426 GAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATGTCTCTTCCTCTTG 103485 |||||| ||||| || ||||||||||| || ||||| ||||||||||| ||||| ||||| Sbjct 9054 GAAGATTAAACGTCCAAAGTAACCATGTGCAGCTACAATGTTGTATGTTTCTTCTTCTTG 9113 Query 103486 TCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCACGAACCAGCGAGGA 103545 ||||| ||||| || | ||| |||||| ||||||| || ||||| | | || || Sbjct 9114 ACCGAATTTGTATCCTTCGTTAGCAGATTCGTTTTCAGTAGTTTCACGGATTAAAGATGA 9173 Query 103546 CGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAAGACTCCAGCAACGCC 103605 || || | ||||||||||| ||| ||| | ||||||||| || || |||||||| || Sbjct 9174 AGTTACTAATGAACCGTGCATTGCAGAGAATAATGAACCACCAAATACACCAGCAACACC 9233 Query 103606 CAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAGAC 103653 | ||||||||| |||||||| |||||||| || || |||||||| || Sbjct 9234 TAACATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCTTGGAAAAC 9281 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 103657 CATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACCTTGACC 103716 |||| ||||||| ||||| || ||||| ||||||||| |||| ||||| |||||||| || Sbjct 10343 CATGAAGTTGAAAGTTCCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGTCC 10402 Query 103717 AAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCGACACA 103776 | || |||| | ||||||||| | ||||| ||||| ||||||||||| || ||| Sbjct 10403 GATAGGATAGATGATGAATACTGCAGTAGCAGCTGCAACTGGAGCAGAGTAAGCTACAGC 10462 Query 103777 GATCCAGGGGCGCAT 103791 ||||| || ||||| Sbjct 10463 AATCCAAGGACGCAT 10477 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 103187 GGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGACCAGCGCGGTTGAGA 103246 ||||||||||| || |||||||||||||| ||||||||||| | ||| ||||||| Sbjct 8165 GGGAAGTTGTGCGCATTACGCTCGTGCATAACTTCCATACCTAAGTTAGCACGGTTGATG 8224 Query 103247 ACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGGACTGGTTGAAGTTG 103306 | ||||||||| ||||| || |||||||| ||| |||| | || |||||||||||| Sbjct 8225 ATGTCTGCCCAAGTGTTTAATACACGACCTTGAGAGTCAACTACTGATTGGTTGAAGTTG 8284 Query 103307 A 103307 | Sbjct 8285 A 8285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633385115523000