Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3654 131 2e-25 >seq3654 Length=3311 Score = 131 bits (144), Expect = 2e-25 Identities = 200/285 (70%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 75175 CTATCTTCAACGGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGT 75234 |||||||| | | || |||||| |||| || || ||| ||||| ||||||| || Sbjct 2162 CTATCTTCTAAGAATCAATGGCAAAGTCATCGAGCGTCCTCAGCACATGCTCATGCGTGT 2103 Query 75235 CGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTC 75294 || | |||||||| | || ||||| ||| || | || ||| || | |||| Sbjct 2102 TGCCCTTGGCATCCATATGCGCAACCTTGATGCTGCTGTGCAAACCTACCACTTGCTGTC 2043 Query 75295 CCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354 | | ||||| || |||| || ||||||||||| |||||||| || || || || Sbjct 2042 TGAGCGCTGGTTCACCCATGCAAGCCCCACCCTCTTCAACGCTGGTACCCCCAGGCCACA 1983 Query 75355 GATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAAC 75414 | || |||||||||||| ||| || ||||| ||| || |||| ||||||| || Sbjct 1982 GCTGAGCAGTTGCTTCCTGATCTGCAGCAAGGGTGACAGCATTGACGGCATCTATGACAC 1923 Query 75415 TCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459 ||||| ||||||||| ||||||||| | || || || ||||| Sbjct 1922 TCTTAAGGAGTGTGCAGTCATCTCAAAGAGTGCAGGAGGCATTGG 1878 Score = 114 bits (126), Expect = 2e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 75884 GCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGT 75943 ||| |||| | |||||| || || |||| || || ||||| |||||||||||||| Sbjct 1092 GCTGTTCTTGAGGCACAGATTGAAACAGGAAACCCCTACATGCTGTACAAGGATGCTTGC 1033 Query 75944 AACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAA 76003 ||| || || ||||| |||| |||| ||||||||| || || || ||||| || Sbjct 1032 AACCGCAAAAGCAACCAGCAGAACCTGGGCACAATCAAGTGCAGCAACCTGTGCACTGAG 973 Query 76004 ATTTTAGAGTACA-CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCT 76062 ||| | ||||||| ||| | |||||||| || || ||||| |||||||| || ||||| Sbjct 972 ATTGTGGAGTACACCAGCCCA-GATGAGACTGCGGTGTGCAACTTGGCATCCATTGCCCT 914 Query 76063 TCCAAAGTATGT 76074 ||| || ||| Sbjct 913 ACCACGGTTTGT 902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596448608228000