Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq10372 168 9e-37 seq334 140 4e-28 seq14182 134 2e-26 seq11472 109 7e-19 seq855 107 3e-18 seq9217 100 4e-16 seq7244 100 4e-16 seq5957 93.3 6e-14 seq10818 84.2 3e-11 >seq10372 Length=14068 Score = 168 bits (186), Expect = 9e-37 Identities = 282/405 (70%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 196445 AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCG 196504 || || || || || || || |||||||| | || | ||||||||| |||| ||||| Sbjct 12704 AAGGTGCAGGACCTGCTCCTGCTTGATGTCACCCCTCTCTCCCTGGGTATTGAGACAGCA 12645 Query 196505 GGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAA 196564 || || || ||||| | | || | | | ||||| || | || || |||||||| || Sbjct 12644 GGAGGAGTCATGACCACTCTGATCGCTCGTAACACCACAGTGCCCACAAAGAAGGAGCAG 12585 Query 196565 GTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAA 196624 ||||| || | | | || || || ||||| || ||||| || |||||||| || Sbjct 12584 GTCTTCAGCACCTTTGCAGACAACCAGCCAGGCGTGTTGATTCAGGTGTATGAAGGGGAG 12525 Query 196625 CGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGC 196683 || | || | ||||||| | || | || | || || || | || || || | Sbjct 12524 CG-TAAGATGACCCGGGATAACAACCTGTTGGGCAAGTTTGAGCTGTCTGGCATCCCCCC 12466 Query 196684 TGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCT 196743 ||||||| | ||||| || ||||| ||||| |||||| || || || ||||| ||||| Sbjct 12465 TGCACCCCGCGGTGTGCCTCAGATCAATGTGATCTTCGACATTGATGCTAATGGTATTCT 12406 Query 196744 AAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGA 196803 || || ||||||||||| ||| | ||||||| | |||||| || |||||||| Sbjct 12405 GAATGTGACAGCTGAGGATAAGACCACTGGCAAGAAGAACAAGATTACCATCACCAATGA 12346 Query 196804 CAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGA 196848 |||||| || || ||||| || ||||| || ||||| ||||| Sbjct 12345 CAAGGGTCGCCTGAGCAAGGATGACATTGAGCGCATGGTACAAGA 12301 Score = 125 bits (138), Expect = 9e-24 Identities = 291/434 (67%), Gaps = 11/434 (3%) Strand=Plus/Minus Query 196016 GAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTT 196075 |||||| || ||||| ||||| || || | |||||| | | || || || || Sbjct 13356 GAGTTCAAGCGCAAGAACAAGAAGGACATCAGCGACAATCCTCGCTCCCTGCGCCGCCTG 13297 Query 196076 AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAG 196135 | || || ||||| || ||||| || ||||| || | | || || || | ||||| Sbjct 13296 CGCACAGCTTGTGAGCGAGCCAAGCGCACTCTGTCCAGTGCAGCACAGACCACCATTGAG 13237 Query 196136 ATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAA 196195 | || || ||| ||| || ||||||||||| | ||||| || | || || ||||| Sbjct 13236 CTGGACTCTCTGTATGAGGGCATTGACTTCTACAGCACTATCACAAGGGCTCGCTTTGAG 13177 Query 196196 GAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGAC 196255 ||| | | ||| |||| | ||||| ||||| || || || | || || || Sbjct 13176 GAGCTGTGCATGGATCTGTTCCGCAAGTGCATGGACCCAGTGGAGAAGGTGCTCAAGGAT 13117 Query 196256 GCAAAGATGGATAA-GTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTAT 196314 || ||| |||| || | || | || |||| |||| |||||||| || ||||| ||||| Sbjct 13116 GCCAAGCTGGACAAGGGCTCA-GTGCATGATGTTGTACTTGTGGGTGGCTCAACTCGTAT 13058 Query 196315 TCCGAAGATTCAACAGATGCTTTCTAGCTT-CTTCAATAATAAAGATTTAAACAAAACGA 196373 || ||| | || ||| ||| | | | || |||||| || || | ||| | | Sbjct 13057 CCCCAAGGTACAGCAGCTGC-TGCAGGATTACTTCAACGGCAAGGAGCTGTGCAAGAGCA 12999 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433 ||||||| ||||| || || ||||||||||| || || |||| | | ||||||| Sbjct 12998 TCAACCCTGATGAGGCTGTGGCTTATGGTGCAGCTGTGCAGG-------TATGTCAGGTG 12946 Query 196434 TTGACAATAATAAC 196447 ||| || | || || Sbjct 12945 TTGGCAGTCATTAC 12932 >seq334 Length=28022 Score = 140 bits (154), Expect = 4e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || || || ||||| || || ||||| || ||||| ||| Sbjct 27638 GTGGTATGCAAATCTTTGTCAAGACACTGACTGGCAAGACCATCACTCTGGAGGTGGAGA 27697 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 || || || || || |||| ||||||||| || ||||| || || || || | Sbjct 27698 GCAGCGATACCATTGAGAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTG 27757 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || |||||||| || ||||| || ||||| || ||||| || || | Sbjct 27758 ACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCAGACT 27817 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||||| || || || || || | | || || ||||| Sbjct 27818 ACAACATCCAGAAGGAGTCCACACTTCATCTGGTGTTGCGCCTGCGCGGTGG 27869 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || || || |||||||| || || || ||||| || ||||| |||||||| || Sbjct 27516 AGGCATCCCCCCTGACCAGCAACGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCG 27575 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 || || || || |||||| | || ||||||||||| || || || || || | || || Sbjct 27576 CACTCTAGCAGACTACAACATCCAGAAGGAGTCTACACTCCATCTGGTGCTGCGCCTGCG 27635 Query 172083 GGGTGGT 172089 |||||| Sbjct 27636 TGGTGGT 27642 >seq14182 Length=2243 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || ||||| || || ||||| || ||||| ||| Sbjct 791 ATGCAAATCTTTGTCAAGACACTGACTGGCAAGACCATCACACTGGAGGTGGAGAGCAGC 732 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| ||||||||| || ||||| || ||||| || || ||| Sbjct 731 GACACCATTGAGAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 672 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| |||||||| || || || || || |||||| Sbjct 671 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTGGCAGACTACAAC 612 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || || || | | || || ||||| Sbjct 611 ATCCAGAAGGAGTCCACACTGCATCTGGTATTGCGTCTGCGTGGTGG 565 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || || || ||||| || || ||||| || || || ||||| |||||||| || Sbjct 918 AGGCATCCCCCCTGACCAGCAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGCCG 859 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 ||||| || || |||||| |||| ||||||||||| || || || || || | || || Sbjct 858 CACCCTAGCAGACTACAACATTCAGAAGGAGTCTACACTCCATCTGGTGCTGCGCCTGCG 799 Query 172083 GGGTGG--TGCAA 172093 ||||| ||||| Sbjct 798 TGGTGGCATGCAA 786 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || || || ||||| || || || |||||||| || ||||| |||||||| || Sbjct 1970 AGGCATCCCCCCTGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCG 1911 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 || || || || |||||| | || ||||||||||| || || || || || | || || Sbjct 1910 CACACTAGCAGACTACAACATCCAGAAGGAGTCTACACTCCATCTGGTGCTGCGCCTGCG 1851 Query 172083 GGGTGG 172088 ||||| Sbjct 1850 TGGTGG 1845 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || || || ||||| || || || || ||||| || ||||| |||||||| || Sbjct 1438 AGGCATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCG 1379 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 || || || || |||||| | || ||||||||||| || ||||| || | | || || Sbjct 1378 CACACTAGCAGACTACAACATCCAGAAGGAGTCTACACTCCACCTGGTGTTGCGCCTGCG 1319 Query 172083 GGGTGG 172088 ||||| Sbjct 1318 TGGTGG 1313 >seq11472 Length=8128 Score = 109 bits (120), Expect = 7e-19 Identities = 129/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 171899 TCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATA 171958 |||| || |||| ||||| ||||| || || || | || |||||| || |||| Sbjct 4969 TCACACTGTAGGTGGAGTCTAGCGACACCATTGAGAATGTAAAGAGCAAGATCCAGGATA 5028 Query 171959 AGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATG 172018 ||||||| ||||| || || ||||| || || || || ||||| || ||||| || |||| Sbjct 5029 AGGAAGGGATTCCTCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATG 5088 Query 172019 GACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || |||||| | || |||||||| || || || || || || Sbjct 5089 GCCGCACCCTTGCAGACTACAACATCCAGAAGGAGTCCACCCTGCATCTGGTGCT 5143 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || || ||||| || || || |||||||| || ||||| |||||||| || Sbjct 7414 AGGTATCCCCCCTGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCG 7473 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 || || || || |||||| | || ||||||||||| || || || || || | || || Sbjct 7474 CACACTTGCAGACTACAACATCCAGAAGGAGTCTACCCTGCATCTGGTGCTGCGTCTGCG 7533 Query 172083 GGGTGGT 172089 || ||| Sbjct 7534 TGGAGGT 7540 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| ||||| || || ||||| || || || |||||||| || ||||| || ||||| || Sbjct 6397 AGGTATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCG 6456 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || || || |||||| | || ||||||||||| || || || || || Sbjct 6457 CACTCTTGCAGACTACAACATCCAGAAGGAGTCTACCCTGCATCTGGTACT 6507 >seq855 Length=18659 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 9/197 (5%) Strand=Plus/Plus Query 195800 ATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACA-------- 195851 ||||||||||| || || || ||||| ||||| |||||| |||||||||| | Sbjct 15421 ATTATCAATGAGCCCACCGCAGCTGCCATTGCCTATGGTTTGGACAAGAAGACACAGGGC 15480 Query 195852 AGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 || || | || |||||| | ||||||||||| || || || || || ||||| || Sbjct 15481 AGCACTGGTGAGCGCAATGTACTCATCTTTGATCTTGGCGGCGGCACCTTCGATGTGTCC 15540 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 | || | ||||| | ||| || || || || ||||| || |||||||| || || || Sbjct 15541 TTGCTGAGCATTGATGATGGCATCTTTGAGGTCAAGGCCACAGCTGGTGACACCCACCTG 15600 Query 195971 GGTGGTGAAGATTTCGA 195987 |||||||| || || || Sbjct 15601 GGTGGTGAGGACTTTGA 15617 >seq9217 Length=12379 Score = 100 bits (110), Expect = 4e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 198797 TGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA 198856 |||||||||||||||||||||||| | |||||||| | || ||||||||||| || || Sbjct 5750 TGGTAATGATGAGCGTGAGCAGACCCTGAACCAGCTGTTGACAGAGATGGATGGCTTCGA 5691 Query 198857 CAATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGC 198916 | || ||||| | |||||||| || || || ||| || ||||| ||| ||| Sbjct 5690 GGGCAACACCGGTATTATTGTGATTGCAGCAACCAACAGGGCAGACATCCTGGATCCTGC 5631 Query 198917 ACTGCTTCGTCCCGGTCGATTCGAC 198941 ||| | ||||| ||||| || ||| Sbjct 5630 TCTGTTACGTCCTGGTCGCTTTGAC 5606 >seq7244 Length=2690 Score = 100 bits (110), Expect = 4e-16 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 171952 CAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTT 172011 || || ||||| ||||| ||||| ||||||||||| | || ||||| || || ||||| Sbjct 734 CAGGACAAGGAGGGCATCCCACCGGATCAGCAACGCTTGATATTTGCCGGCAAGCAGCTG 675 Query 172012 GAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTT 172071 |||||||| || ||||| || || || ||| | || ||||||||||| | || ||||| Sbjct 674 GAAGATGGCCGCACCCTTGCAGACTATAACATCCAGAAGGAGTCTACCTTGCATCTTGTA 615 Query 172072 CTAAGGCTTCG--GGGTGGTGCAA 172093 || | | | ||||||||||| Sbjct 614 CTGCGTTTAAGGTGGGTGGTGCAA 591 >seq5957 Length=6841 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/125 (77%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 195800 ATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAA 195859 || |||||||| || ||||| ||||| ||||||||||||||||||||| |||| || | Sbjct 4710 ATCATCAATGAGCCCACAGCTGCTGCCATTGCTTATGGTCTGGACAAG---AAGGGCGGA 4654 Query 195860 GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAAT 195919 || || || | | | || || || ||||||||||| || ||||||||| | || | Sbjct 4653 GAGAAGAACATCCTCGTGTTCGACCTGGGTGGTGGTACATTCGATGTCTCAATCCTGACA 4594 Query 195920 ATTGA 195924 ||||| Sbjct 4593 ATTGA 4589 Score = 86.0 bits (94), Expect = 8e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || ||| | | | | || || || ||||| | || ||||||||| Sbjct 5095 AAGATGAAGGACACAGCTGAAGCATACCTTGGCAAGACAGTGAAGCACGCTGTTGTGACT 5036 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGC 195768 ||||| || ||||||| ||| |||| || ||||| |||||||| || Sbjct 5035 GTACCAGCCTACTTCAATGACGCACAGCGCCAGGCAACAAAGGATGC 4989 >seq10818 Length=5054 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| |||||||| || || ||||||||||||||||| ||||| Sbjct 5023 ATGCAGATCTTTGTGAAGACCCTTACGGGCAAGACTATCACCCTCGAGGTGGAGTCTAGC 4964 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || | || || ||||| || ||||| || Sbjct 4963 GACACTATCGAGAATGTGAAGCAGAAAATTCAGGACAAGGAGGG 4920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657728977282000