Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq11390 215 2e-51 seq312 194 5e-45 >seq11390 Length=1714 Score = 215 bits (238), Expect = 2e-51 Identities = 259/347 (75%), Gaps = 4/347 (1%) Strand=Plus/Minus Query 40403 GCGCGCCTTGATCCGTCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCG 40462 ||||||||||| | ||| | || |||||||||||| | ||| ||||| ||| | Sbjct 644 GCGCGCCTTGAGCTTGCCGAAGGTGATGATCTGCGCGACGTGATCGCTGCCGTATTTC-G 586 Query 40463 GGTG-ACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATCGG 40521 || ||||| ||||||||||||| || ||| || ||||||||||||| |||| Sbjct 585 CCTGCACGTAGCGGATCACCTCGCCGCGCCGCGTTTCGCAAAAGTCGATGTCGAAGTCGG 526 Query 40522 GCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGT 40581 |||| || |||||||||||||| ||||| || ||||| | || ||| ||| || || | Sbjct 525 GCATCGAGACGCGCTCGGGGTTGAGGAAGCGTTCGAACAGCAGGCCGAGCTTCAAGGGAT 466 Query 40582 CGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAG 40641 |||| |||||||| ||| | |||| ||| |||||| || | ||||| ||||| | Sbjct 465 CGAGATCGGTGATGGTGAGCGCCCAGGCCACCGCCGAACCCGCGCCCGAGCCGCGCCCCG 406 Query 40642 GGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGT 40701 | || ||| || ||| | ||||| ||||| ||||||||| ||||||| ||||||| Sbjct 405 GCCCCACCGGGATGCCCTGTTCCTTGGCCCACTTGATGAAGTCGGCGACGATCAGGAAGT 346 Query 40702 ACGACGGGAA-GCCCATCTGGATGATCATGTCGATCTCGTACTGGAG 40747 | | |||||| |||||||| | ||||| |||||||||||| | ||| Sbjct 345 A-GCCGGGAAAGCCCATCTTCACGATCACGTCGATCTCGTATTCGAG 300 Score = 105 bits (116), Expect = 2e-18 Identities = 340/517 (66%), Gaps = 43/517 (8%) Strand=Plus/Minus Query 39537 TCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGA 39596 ||||| |||| |||||| ||||||||||||| || ||||| || |||||||| Sbjct 1465 TCCTTCGCCATCTCCTCGGCGATCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCTCCG 1406 Query 39597 CCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATG 39656 || ||| |||| || |||||||||||||| | || | |||||| |||||||||| |||| Sbjct 1405 CCAAGGCTGTATCCCGCCATGACCTGCGCGATCTGCATCACCTGTTCCTGGTAGACGATG 1346 Query 39657 AGCTGGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGC 39716 | | ||||| | | ||||| | |||| | ||| | | |||| | Sbjct 1345 ATGCCGTAGGTCTCGGCGAGGAT---------GCCCTCGAGCTTCTC-GTGCGGATATTC 1296 Query 39717 GTGATCGCCTGCT-GCCCGTTCTTACGGAGGGCGTAGTTCG---TGTGAGACCCCACGCC 39772 ||||| | || ||||| ||| || || || | || ||| | | Sbjct 1295 --GATCGGCACCTCGCCCG-CCTTGCGCTGGCCGAACAGCGGAATGT---------TGTC 1248 Query 39773 CATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTT 39832 |||||| ||||| ||||| |||| ||||| || |||||| |||| ||| |||||| Sbjct 1247 CATCGGCCCCGGGCGGTAGAGCGAGACGAGCGCGATGATGTCGCCGAAATTGGTCGGCTT 1188 Query 39833 CAGCAGACGGAGCAGTG-AGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGT 39891 || | |||| ||| ||||||| | || ||||||||||| || | ||||| Sbjct 1187 CACCGCCTTGAGC-GTGCGGCGCATCCCTTCGGATTCGAGCTGGAACACGCCCACCGTGT 1129 Query 39892 CGCC--CCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTC 39949 ||| |||| || ||||||||| || || ||||| || |||| || || || Sbjct 1128 TGCCCGCCTG--CATCAGCTCGTAGACTGCCGGATCGTCGAGCCCGATGGCGTCGAGATC 1071 Query 39950 GACG----TGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGA 40005 || | ||| | | | | || || || |||||||| | || || | || || Sbjct 1070 GATGGCGATGCCGCGCGCCG-CGA-GCAGA-----TCGACCGCCTTGCGCAGCACCGAGA 1018 Query 40006 GGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCC 40042 | || |||||||||||||| | ||||| ||| || Sbjct 1017 GCGTCTTCAGCCCGAGGAAGTCGAACTTCACCAGCCC 981 >seq312 Length=5289 Score = 194 bits (214), Expect = 5e-45 Identities = 279/391 (71%), Gaps = 7/391 (2%) Strand=Plus/Minus Query 40354 CGACCTGGA---AGGGCTTGTCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCT 40410 |||||||| ||||| | | |||||||||| | |||| || | || ||| |||| Sbjct 1141 CGACCTGGCCATAGGGCATCTGCAGCACGCGGCCGACGTCGCGCAGCACGGCGCGGGCCT 1082 Query 40411 TGATCCGTCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGT 40470 | | ||| | || ||||||||| |||| ||| |||||||| | ||||| Sbjct 1081 GCAGCGTGCCGAAGGTGATGATCTGCGCCACCTGCTCGCGGCCGTACTTGCCCTGGACGT 1022 Query 40471 ACTGGATCACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGA 40528 | ||||||||||| | || || || | || |||||||||||||| |||||||| || Sbjct 1021 AGCGGATCACCTCGTCGCGCCGGTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGA 964 Query 40529 CACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTC 40588 ||||||||||||||| ||||| |||||||| | || || || |||||||||||| Sbjct 963 CACGCGCTCGGGGTTGAGGAAGCGCTCGAACAGTAGCGCGAAGCGCATCGGGTCGAGGTC 904 Query 40589 GGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGAC 40648 ||| | | || |||||||| ||||| || || | ||||| || || || ||||| Sbjct 903 GGTCACCGTCAGCGAATAGGCGACGAGCGAGCCCGCGCCCGAGCCGCGGCCCGGCCCGAC 844 Query 40649 CCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGG 40708 | || | | |||||||||| ||||||||| ||||||| ||||||||| || Sbjct 843 GGGAATCCCTTGCGCCTTCGCCCACTTGATGAAGTCGGCGACGATGAGGAAGTAGCCGGG 784 Query 40709 GAAGCCCATCTGGATGATCATGTCGATCTCG 40739 ||| |||| || |||| | ||||| |||| Sbjct 783 GAACTTCATCCGGGTGATGACGTCGAGCTCG 753 Score = 100 bits (110), Expect = 9e-17 Identities = 251/373 (67%), Gaps = 24/373 (6%) Strand=Plus/Minus Query 39559 TCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGA 39618 ||||||||||||| || ||||| ||||||||||||| ||||| | ||| || | || || Sbjct 1888 TCTTCTTGCCCATGGCGCGGCGCAGCAGGTCGGCCTCGCCGAGCGAGTAGCCCGACAGGA 1829 Query 39619 CCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGA 39678 |||||| | || | ||||||||||||||||| ||||| | ||||| || Sbjct 1828 TCTGCGCGATCTGCATCACCTGCTCCTGGTAGACGATGATGCCGTAGGTC---TC----- 1777 Query 39679 TCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGT-GATCGCCTGCTGCCCGTTC 39737 || | || | |||| || | || ||||| | || | | | | || |||| | Sbjct 1776 -CTTCAGCACCGGCTCGAGCAGC---GGATGGAT-GTAGTCGGGCACTTCGTGGCCGTGC 1722 Query 39738 TTACGGAGGGCGTAGTTCGTG-TGAGACCCCACGCCCATCGGACCCGGACGGTACAGCGC 39796 || || | ||||| || | || || ||||||| || || ||||| ||||| Sbjct 1721 TTTCGCGCGCCGTAGACCGGGATG------TTCG-CCATCGGGCCGGGGCGGTAGAGCGC 1669 Query 39797 GACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCA-GCAGACGGAGCAGTGAGCGCA 39855 ||||| || ||||||||||||| ||| ||||| | | | | || | ||||| Sbjct 1668 GACGAGCGCGATGATGTCCTCGAAGCGGTCGGGCTTGATGTCGGC-GATCGCCTTGCGCA 1610 Query 39856 TCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTACG 39915 | | || ||||||||||| || || || |||||| | ||| |||| ||| | Sbjct 1609 TGCCCATGCTTTCGAGCTGGAACACGCCGACGGTCTCGCCCTTCTGCAGGAGCTTGTAGG 1550 Query 39916 TCGCGGGGTCGTC 39928 | || |||||||| Sbjct 1549 TGGCAGGGTCGTC 1537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163853224008300