Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021311.1 Length=76479 Score E Sequences producing significant alignments: (Bits) Value seq106 361 3e-95 seq13239 269 1e-67 >seq106 Length=4709 Score = 361 bits (400), Expect = 3e-95 Identities = 536/757 (71%), Gaps = 7/757 (1%) Strand=Plus/Minus Query 66682 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66741 |||| ||||| ||| || ||| ||| || |||||||| ||| ||| | || || Sbjct 3597 CCACGGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGGCTGCCGCGCGGGCGCA 3538 Query 66742 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66801 | || || |||||||| || ||||| || || ||| | || || || || |||||| Sbjct 3537 TCGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTGCATACGGTGG 3478 Query 66802 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66861 || | ||||||||| ||| |||| | ||||| ||||||||| |||||| | || |||| Sbjct 3477 CCGAGGCGCAGAAGCGCGGCGGCATCTGCGCCTTCATCGACGCCGAGCACGCGCTCGACC 3418 Query 66862 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66921 | |||||| |||||| || |||||||| ||||| || | ||||||||| Sbjct 3417 CGATCTACGCCCGCAAGCTCGGCGTCAACCTCGACGACCTCCTGATCTCGCAGCCGGACG 3358 Query 66922 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--T 66979 | ||||||||||| || |||||| ||| || || || || | | ||| | | Sbjct 3357 CCGGCGAGCAGGCGCTCGAGATCTGCGACACGCTGGTGCGCTCGGGTG--CCGTCGACGT 3300 Query 66980 CGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGG 67039 ||||||| || || || ||||| ||| |||||| ||||||||||| ||||| || || Sbjct 3299 GCTCGTCGTCGATTCGGTCGCGGCGCTGACGCCGCGGGCCGAGCTCGAGGGCGAGATGGG 3240 Query 67040 GGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACCGG 67099 || | ||||||||| |||||||| ||| ||||| ||||||||||||||| Sbjct 3239 TGATTCGCTGCCCGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGC 3180 Query 67100 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 67159 | | ||||| | | || || || | ||| |||||||| | || ||||||||| Sbjct 3179 CTCGATCTCGAAGTCGAAGACCATGGTGATCTTCATCAACCAGATCCGGATGAAGATCGG 3120 Query 67160 CAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGC 67219 | || | | |||| |||||||||||||||||||| || | | ||||||||| Sbjct 3119 CGTGATGTTCGGCAGCCCC---GAGACCACCACGGGCGGCAACGCGCTCAAGTTCTACGC 3063 Query 67220 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGG 67279 ||| |||||| | || |||||||||||| | | |||| |||| |||| ||||| Sbjct 3062 CTCCGTCCGCCTCGACATCCGTCGCATCGGCGCGATCAAGGCGCGCGACGAGGTCGTCGG 3003 Query 67280 CAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGA 67339 ||||| ||||| || ||||| || ||||||||||| ||||||||| |||| | ||| Sbjct 3002 CAACCAGACCCGCGTCAAGGTGGTGAAGAACAAGCTCGCCCCGCCGTTCCGCGAGATCGA 2943 Query 67340 GTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGT 67399 |||| | || ||||||| |||||||||||| | ||| ||| |||| || | ||| Sbjct 2942 GTTCGACATCATGTACGGCGAGGGCATCTCGAAGCTCGGCGAGCTCGTCGATCTCGGCGT 2883 Query 67400 GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 67436 | ||| | | | ||||| |||||||||||| Sbjct 2882 CAAGGCCGGCATCATCGACAAGTCCGGCGCCTGGTTC 2846 >seq13239 Length=1369 Score = 269 bits (298), Expect = 1e-67 Identities = 519/759 (68%), Gaps = 26/759 (3%) Strand=Plus/Minus Query 66624 TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAGCCACAGACTGTGGACGTC------ 66677 |||||| || ||||| ||||||||||| ||| |||| || | ||| Sbjct 776 TTCGGCAAGGGTTCGGCGATGAAGCTGGGCTCGAAGG---AGACGATGCAGGTCGAGGCG 720 Query 66678 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 66737 || | |||||||| ||| || ||| ||| || |||||||| || | || | |||| Sbjct 719 ATCTCGACCGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGCTTGCCCAAGGGC 660 Query 66738 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 66797 || ||| | || |||| ||||| ||| || || ||| | || || ||||| | Sbjct 659 CGCGTGATCGAGGTCTATGGCCCGGAAAGCTCGGGCAAGACGACGCTCGCGCTCCATGTC 600 Query 66798 GTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTG 66857 | ||| | ||||||||||| || |||| ||| |||| | |||| || || || | || Sbjct 599 ATCGCCGAGGCGCAGAAGGCGGGCGGCACCGCGGCCTTCGTCGATGCCGAACATGCGCTC 540 Query 66858 GACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCG 66917 || || | || |||||| |||||| || ||| ||||| | || | || ||||| Sbjct 539 GATCCGGTCTATGCCAAGAAGCTCGGGGTCGACATCGACGAGCTGATCGTTTCGCAGCCC 480 Query 66918 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 66977 ||||| ||||| ||||| || |||||| ||| || || || || | | | Sbjct 479 GACACCGGCGAACAGGCGCTCGAGATCACCGACACGCTGGTGCGCTCGAACGCGATCGAC 420 Query 66978 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 67037 | | || || ||||| |||||||| |||||||||||||||||| |||| ||||| || Sbjct 419 GTGCTGGTGGTCGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAGATCGAGGGCGAGATG 360 Query 67038 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACC 67097 || || |||||||||||||| || || || ||| ||| | |||||||||| ||| Sbjct 359 GGCGATTCGCACGTCGGCCTGCAGGCCCGGCTGATGAGCCAGTCGCTGCGCAAGCTGACC 300 Query 67098 GGCACCATCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 67154 ||| | ||| | || | || || | ||| ||| |||||||| ||||| |||| Sbjct 299 GGCTCGATCAACCGCTCGAAGTGCATGGTGA---TCTTCATCAACCAGCTGCGCATGAAG 243 Query 67155 ATCGGCAACGTGGGCTACGGCCCGAAT---GAGACCACCACGGGCGGCAAGGCTTTGAGG 67211 |||| ||| |||||| ||| |||||||| || |||||||| || | | | Sbjct 242 CTCGG---GGTGATGTACGGC---AATCCCGAGACCACGACCGGCGGCAACGCACTCAAG 189 Query 67212 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGATGA 67270 ||||| || || || | || |||| |||| || | | || ||||| |||| || Sbjct 188 TTCTATGCGAGCGTGCGGCTCGACATCCGCCGCACCGGC-CAGATCAAGGACCGCGACGA 130 Query 67271 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 67330 | |||||||| ||| || |||||||| |||||||||||| | || ||||| | Sbjct 129 GATCATCGGCAACACCACGCGCGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCCTTCAA 70 Query 67331 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTC 67369 | | ||||||| | || ||||||| ||||||||||| Sbjct 69 GCAGGTCGAGTTCGACATCATGTACGGCGAGGGCATCTC 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244559630679000