Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3654 120 9e-22 seq7137 102 2e-16 seq7097 84.2 6e-11 >seq3654 Length=3311 Score = 120 bits (132), Expect = 9e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 |||| || |||| || || ||||||||||| | | | |||| || ||||||||| Sbjct 918 CAATGGATGCCAAGTTGCACACCGCAGTCTCATCTGGGCTGGTGTACTCCACAATCTCAG 977 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||||||||| | |||||| ||||| | |||| |||||| ||| | ||| |||| Sbjct 978 TGCACAGGTTGCTGCACTTGATTGTGCCCAGGTTCTGCTGGTTGCTTTTGCGGTTGCAAG 1037 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAA 155757 |||||||||| || ||||| ||| ||||||| || |||||||| || |||| Sbjct 1038 CATCCTTGTACAGCATGTAGGGGTTTCCTGTTTCAATCTGTGCCTCAAGAA 1088 >seq7137 Length=7143 Score = 102 bits (112), Expect = 2e-16 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 252546 ATAATTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCT 252605 ||| || || ||||||| || | |||||||| ||||| ||||||||||| ||||| | Sbjct 6093 ATAGTTGGTGGCATACATGCCCATAGCCTGCTTGCCCATGGCACTCTGGTAGGTATTACG 6152 Query 252606 GGGAGACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTAC-AACACCGAAGATAGTGC 252664 ||| ||||| |||| || |||||||| ||| ||| || || ||| || | ||| || Sbjct 6153 GGGTGACTGGTTGTGATCAGGGAAAGGGATG-ATGCTGGCACAAACTCCCAGGATCATGG 6211 Query 252665 TTGGGTGAATTTCACAGTGACTGTA 252689 |||||||||||| ||||| |||| Sbjct 6212 CTGGGTGAATTTCGCAGTGCGTGTA 6236 >seq7097 Length=3111 Score = 84.2 bits (92), Expect = 6e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 410487 GCCCGCGTGACGCAATGGATAGCGTGCCAGACTTCTAATCTGGAAGTTGCGGGTTCGAGT 410546 |||||| || |||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct 184 GCCCGCTTGGCGCAATGGATAGCGCACCAGACTTCTAATCTGGGGGTTGTGGGTTCGAGT 243 Query 410547 CCCGTCGTGGG 410557 ||| ||||| Sbjct 244 CCCACAGTGGG 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471511634417825