Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq8309 109 1e-19 >seq8309 Length=800 Score = 109 bits (120), Expect = 1e-19 Identities = 188/271 (69%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 26114 GCCCGCCGTAGCGTATGCGGTCGGCCTGCGCGCGAAGATCGATCAACAAACCGGCTGGCA 26173 ||| |||| ||| || |||||||||||||| ||| |||| | || ||||||||| Sbjct 361 GCCGGCCGCGGCGGTCGCCGTCGGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCA 420 Query 26174 TAAGACGCTCTCGAACGTCGCTGTGAATGGCGTCGAAGG---GATCAGCAAG-CCGGTTT 26229 |||||| |||| |||||||| || || ||||||| || || | ||||| | | || Sbjct 421 CAAGACGATCTCCAACGTCGCGGTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAGCTT 480 Query 26230 CGTGGGATTTGCAGAACCCGGCGACCGATGCGGGTTTCCTCAACGAGAATCAGGTCACGA 26289 | | ||||| |||| ||||||| || || |||| |||| ||||| Sbjct 481 C----GCCCTGCAGGACCCCTCGACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCG 536 Query 26290 CGCTGATCAACCGGAACGGCTTCCGATTCTGGGGCTCGCGCACGGCGTCCGACGATCCGC 26349 |||||||| || |||||||||||| ||||||||| | || || ||||| ||| Sbjct 537 CGCTGATCCGCCAGAACGGCTTCCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGG 596 Query 26350 TGTTCGCGTTCGAAAACTACACGCGCACGGC 26380 ||| |||||||| | | | ||||| || Sbjct 597 CCTTCCAGTTCGAAAGCGCCGCCCGCACCGC 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113232579062400