Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq312 125 7e-24 seq14372 93.3 4e-14 >seq312 Length=5289 Score = 125 bits (138), Expect = 7e-24 Identities = 188/265 (71%), Gaps = 9/265 (3%) Strand=Plus/Plus Query 105020 CATCACCAGCAAGAACTTCGCCGGGTACTTCAACGTCGTCGCCGACTACACCAAGTGGGC 105079 ||||||| | | ||| ||| |||| |||||| | |||||||||||| || ||||||||| Sbjct 765 CATCACCCGGATGAAGTTCCCCGGCTACTTCCTCATCGTCGCCGACTTCATCAAGTGGGC 824 Query 105080 TAAGGACC---GCATGCTCGTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTC 105136 |||| | | || | |||||| || ||||| || |||| || |||||||||||| | Sbjct 825 GAAGGCGCAAGGGATTCCCGTCGGGCCGGGCCGCGGCTCGGGCGCGGGCTCGCTCGTCGC 884 Query 105137 GTA---CCTGATGGACATCACCGAGCTCGACCCGATCAAGTACGACCTGATGTTCGAGCG 105193 || |||| || | ||||| ||||||||||| | || || |||||||||| Sbjct 885 CTATTCGCTGACGG---TGACCGACCTCGACCCGATGCGCTTCGCGCTACTGTTCGAGCG 941 Query 105194 GTTCATCTCGCCGGAGCGGAAGAACTTCCCCGACATCGATCTCGACTTCCCGCAGAAGCG 105253 ||| || || ||||| | | |||||| |||| |||||||| ||| | || Sbjct 942 CTTCCTCAACCCCGAGCGCGTGTCGATGCCCGACTTCGACATCGACTTCTGCCAGGACCG 1001 Query 105254 TCGCGGCGAGGTCGTCGACTACATC 105278 |||| |||||| || |||| || Sbjct 1002 GCGCGACGAGGTGATCCGCTACGTC 1026 >seq14372 Length=1098 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105105 GGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTCGTACCTGATGGACATCACCGAGCTCGAC 105164 ||||| || ||||| | |||| | ||| | |||| | | ||||||| | ||||| Sbjct 526 GGCCGCGGCTCGGCGGCCAACTCGGTGATCTGCTTCCTGCTCGGCATCACCAACGTCGAC 467 Query 105165 CCGATCAAGTACGACCTGATGTTCGAGCGGTTCATCTCGCCGGAGCGGAAGAACTTCCCC 105224 || || |||| || |||||| || ||||||||| |||||| || | ||| Sbjct 466 CCCGAGGAGATCGACGTGCTGTTCGCCCGCTTCATCTCGAAGGAGCGCCAGGAGCCGCCC 407 Query 105225 GACATCGATCTCGACTTCCCGCAGAAGCGTCGCGGCGAGGTCGTCGACTACATCGCCGAC 105284 |||||||| |||||||| ||| |||| |||| ||||| || | |||||| ||| Sbjct 406 GACATCGACGTCGACTTCGAGCACGAGCGCCGCGAGGAGGTGATCCAGTACATCTACGAG 347 Query 105285 CGCTACGGCCACGACTGCG 105303 |||||||||| | || ||| Sbjct 346 CGCTACGGCCGCCACCGCG 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455981102573000