Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq14742 513 2e-140 >seq14742 Length=52551 Score = 513 bits (568), Expect = 2e-140 Identities = 728/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Plus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | ||| || ||||| ||||| || ||||| || || || ||| | Sbjct 37774 GATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCAGGTCTTCTTCTTTTC 37833 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||||||| | || |||| |||||| ||||||| ||| ||||||| || ||| Sbjct 37834 CCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACTTTTGTAACATCATGG 37893 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 ||||| || ||| | ||| ||| ||| | || ||| |||||| | ||||||||||| Sbjct 37894 TACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTCTTAACAGCAGCTGTT 37953 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTT-TGGGGTCCTGAGTCTC- 159543 || || ||||| || ||||| ||| ||| || || | ||| ||||| ||||| | | Sbjct 37954 TCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATGGGGACCTGAAGCACA 38012 Query 159544 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACG 159603 ||| || ||| | || ||||| ||| | || || |||||| ||| | || | || | Sbjct 38013 AGGTGACTTTAC-TCGTTGGTGTCAATTAGGTGGTCTATGGACATTTATTGCTTTACATG 38071 Query 159604 GTGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACGTCTCA-TTGGT 159662 | | |||| ||||||| || ||| | ||||| |||||| | || ||| ||| || | Sbjct 38072 GATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTGCTCGT-TCAGTTAAT 38130 Query 159663 ATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTC 159722 | ||||| |||||||||||||| ||||| | |||||| | |||||||| || ||| Sbjct 38131 TTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTTTTTGTTTCAGTTTTC 38190 Query 159723 CTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCA 159782 | || |||||||| || || || | |||||||| ||||| ||||| || ||||| Sbjct 38191 TTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGTTTTGGTGTAGCAGCT 38250 Query 159783 ATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCAT 159842 || || | ||| | || || | ||||| || || |||||||| ||||| || ||||| Sbjct 38251 ATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACTTTAAACCCATTCCAC 38310 Query 159843 ATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACT 159902 |||||||| || || ||| | |||| | || ||| | |||| || || || | |||| Sbjct 38311 ATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCTATTCACGGTGCTACT 38370 Query 159903 GTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCA 159962 || || |||||| | | ||||||||| || || || || || || ||| | || Sbjct 38371 GTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTCCGTGCATTTAACCCA 38430 Query 159963 ACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 160022 || |||| || || |||||||| ||||| || || ||||| |||||||| || || || Sbjct 38431 ACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTCTGGTCTCAAATTTTT 38490 Query 160023 GGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATG 160082 || |||| || || || || || |||||||| ||||||||| | |||| |||||| | Sbjct 38491 GGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTTCTTGTTCCTGTTGTA 38550 Query 160083 GGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACGAT 160142 |||||||||| || ||||||| | |||| | ||| | ||| | |||||||| || Sbjct 38551 GGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAATTTACGTGCTTATGAC 38610 Query 160143 TTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAA 160202 ||||| ||||| || | ||||| || ||||| ||||| || || |||||||| ||| Sbjct 38611 TTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAAACTTTCTACACAAAA 38670 Query 160203 AACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAA 160262 || || | || || ||||| | ||||| ||| |||| | || ||||| |||||| Sbjct 38671 AATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAAGACCAACCACATGAA 38730 Query 160263 AACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATAAAGATT 160318 || | ||||| ||||||||||| ||| | || || || || |||| || ||| Sbjct 38731 CGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTATAATCAATATT 38786 Score = 289 bits (320), Expect = 3e-73 Identities = 273/348 (78%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 158084 GTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGG 158143 || |||||||| || |||||||| ||||||||||| ||||| ||| | ||||||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 158144 GTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTT 158203 ||||| ||||| || | |||||||| |||||||| | || ||||| || | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 158204 CGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAG 158263 |||||||| ||||||| || || ||| | || ||||| ||||||||||| ||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 158264 ACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 158323 || || ||||| || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 158324 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 158383 ||||||||||| ||||| || ||||||||| | ||||| ||||| || || || || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 158384 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTC 158431 ||||| || | || | || || |||||||||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 246 bits (272), Expect = 3e-60 Identities = 287/382 (75%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 157571 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 157630 |||| | ||| || || ||| | ||| ||| | ||||| | || ||||||||||| Sbjct 12280 TGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTC 12221 Query 157631 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGT 157689 || || | ||||| || || | || |||| || ||||| |||||| |||| ||| | Sbjct 12220 GGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCAT 12162 Query 157690 CGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 157749 |||||| || || || || ||||| || || ||||| || || |||||||| | | || Sbjct 12161 CGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATA 12102 Query 157750 TGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTT 157809 || |||||||||||||||||||| ||||| || | || ||||| |||||| | || || Sbjct 12101 CGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTT 12042 Query 157810 CTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCA 157869 ||| || || |||||||| |||| | ||||||||| | || ||||||||||||| ||| Sbjct 12041 CTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCA 11982 Query 157870 ACTCGTAGTATTTCACTTCCTCATTGGTATCTA-TGCATACATGGGACGTGAGTGGGAAC 157928 | | | || | |||||| || | ||||| | ||| |||||||| ||||| |||||| Sbjct 11981 ATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAAT 11923 Query 157929 TTTCATACCGTTTAGGTATGCG 157950 | || ||||||||||||||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 136 bits (150), Expect = 4e-27 Identities = 111/135 (82%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 157946 ATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTC 158005 ||||| || ||||| |||||| || ||||||||||| || || || |||| |||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 158006 CTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 158065 || |||||||| |||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 158066 ACTTTTAACTACATG 158080 ||||| |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 158430 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 158489 ||||||||||||| || | |||| ||| |||||||| || ||||| |||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 158490 TACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 158549 | | ||||| ||| | ||||||||||||||||| |||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 158550 CACTCGACCTTGCTGCTGCTGA 158571 || | ||| | || ||| ||| Sbjct 8165 CATTAGACTTAGCGTCTGTTGA 8144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548263182817000