Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq14742 408 5e-109 >seq14742 Length=52551 Score = 408 bits (452), Expect = 5e-109 Identities = 720/1045 (69%), Gaps = 27/1045 (3%) Strand=Plus/Plus Query 73360 ATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTC 73419 ||||||||| | ||||| |||||| ||| ||||| ||||| | || ||||| Sbjct 37758 ATGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTC 37817 Query 73420 TGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTAC 73479 |||||| | ||||| ||||||||||| | ||| | ||||||||||| || || || Sbjct 37818 AGGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAAC 37877 Query 73480 TTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTT 73539 ||| || || |||||||||||||||||| | || || |||||| | || || || || Sbjct 37878 TTTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTT 37937 Query 73540 TTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTG 73599 ||||| ||||| || ||||| |||| | ||||| ||| | |||| ||| | || Sbjct 37938 CTTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCTTTATTATTCTTATG 37997 Query 73600 GGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTT 73659 |||||| || |||||||| || || || |||| |||||||||||| ||||||| || Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACATT 38057 Query 73660 TGTAGCATTACATGGAGTCTTT-GGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTG 73718 | | || ||||||||| ||||| || | || || || ||| | | || ||||| |||| Sbjct 38058 TATTGCTTTACATGGA-TCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTG 38116 Query 73719 CAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTAT 73778 | | ||| ||||||| ||||| || | ||||| || || ||| |||| | Sbjct 38117 CTCGTTCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGT-T 38175 Query 73779 TCACGAGCATCTTTC-TAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCA 73837 | || |||| |||| || || |||||||| | | ||||| || || ||| Sbjct 38176 TTTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGT 38235 Query 73838 TTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACT 73897 || ||||| ||||| || || |||| |||||||| | || || ||||| || ||| Sbjct 38236 TTTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACT 38295 Query 73898 CTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCC 73957 | || ||||| || |||||||||||||||||| | | || | || || ||||||| Sbjct 38296 TTAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCT 38355 Query 73958 ATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGT 74017 || || ||||| || || | |||||||| | ||||| | ||| ||| Sbjct 38356 ATTCACGGTGCTACTGTTGAAAACACATTATTTGAAG------------ATGGTGACGGT 38403 Query 74018 AAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGT 74077 ||| || ||| | ||||| | || ||||| | ||||| ||||| Sbjct 38404 ---------GCTAACACATTCCGTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCA 38454 Query 74078 ATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGA 74137 ||| | || || ||| | |||||||| || || ||||| | || || ||||| ||| | Sbjct 38455 ATGGTAACAGCGAACCGTTTCTGGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGT 38514 Query 74138 TTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGT 74197 | | |||||| | ||| | | || ||||| | ||| | |||| ||| |||| ||| Sbjct 38515 TGGCTTCACTTCTTCATGCTTCTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGT 38574 Query 74198 ATCGTAGGTCTAGCACTTAACCTTA-GAGCATACGACTTTGTATCTCAAGAGATAAGAGC 74256 | || || |||| |||| ||| | || || ||||| || || ||||| || | || Sbjct 38575 GTAGTTGGGTTAGC-TTTAAATTTACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGC 38633 Query 74257 AGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTAT 74316 ||| || || || || || ||||| |||||||| || || ||| || | ||||||||||| Sbjct 38634 AGCTGAGGATCCGGAATTCGAAACTTTCTACACAAAAAATATTATTTTAAATGAAGGTAT 38693 Query 74317 GAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGT 74376 | || |||||| | | || ||||| ||||| |||| ||||| |||||||| Sbjct 38694 CCGTGCTTGGATGGCTGCGCAAGACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGT 38753 Query 74377 CTTGCCACGAGGCAACGCACTATAA 74401 || || || || || || |||||| Sbjct 38754 ATTACCTCGTGGTAATGCTCTATAA 38778 Score = 280 bits (310), Expect = 2e-70 Identities = 272/350 (78%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 72737 TCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAG 72796 |||| |||||||| || |||||||| || |||||||| ||||| ||| |||||| || | Sbjct 9283 TCGTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTG 9224 Query 72797 GTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCACTTGTTACTTCATCTCTAA 72856 || | || |||||| | ||| |||||||||||||||| | || ||||||||| ||| Sbjct 9223 GTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAA 9164 Query 72857 TCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAG 72916 || | || || || || ||||| | ||| | || || || ||||| |||||||||| Sbjct 9163 TCCGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAG 9104 Query 72917 AAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCAT 72976 ||||||| |||||||| ||||| ||||| ||||| || | ||||||||||| || || | Sbjct 9103 AAACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTT 9044 Query 72977 CATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTAT 73036 | |||||||||||||||||||||||||||||| | |||| | || ||||| || | | Sbjct 9043 CTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTT 8984 Query 73037 GGTTAACCTCAATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTC 73086 |||| || | | ||||| | || |||||||||||| | ||||||||| Sbjct 8983 GGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 241 bits (266), Expect = 1e-58 Identities = 277/370 (75%), Gaps = 2/370 (1%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 |||||||| ||| | || ||||| || || | ||| | |||||||| ||||| | Sbjct 12271 TTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTCGGTGTTATC 12212 Query 72295 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 72354 |||||||| | |||| ||| || || ||||| | || ||||||||||| ||| Sbjct 12211 ATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCATCGCTTTCATCGCTGCACCT 12152 Query 72355 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 72414 ||||| |||||||| || || | || |||||| | ||||| || ||||| || |||||| Sbjct 12151 CCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACAAC 12092 Query 72415 ATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATC 72474 ||||||||||||||||| ||||| | |||||||| || || ||||| ||||| || || Sbjct 12091 ATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTTCTACCCAATT 12032 Query 72475 TGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTATT 72534 |||||||| | || | || |||||||| || ||||| ||||||||||| ||| | || Sbjct 12031 TGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTT 11972 Query 72535 TTCCACTTCCTTATTGGAATCT-CTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 72593 | ||||||| | | || || | ||| |||||||||| | | |||||| |||| ||| | Sbjct 11971 TGCCACTTCTTCTTAGGTATTTGCTG-CTACATGGGTCGTGAATGGGAATTATCTTACCG 11913 Query 72594 ACTAGGAATG 72603 |||| ||| Sbjct 11912 TTTAGGTATG 11903 Score = 109 bits (120), Expect = 6e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 72601 ATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTC 72660 ||| | |||||||| |||||| ||||| || || || | || || |||||||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 72661 CTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGT 72720 | | ||||| |||| || ||||| ||||||||||||||||| |||||||||| || Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 72721 ACGTTCAACTTCATG 72735 || |||||||||||| Sbjct 10357 ACTTTCAACTTCATG 10343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572757414073000