Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq15219 138 1e-26 seq8947 138 1e-26 seq10231 132 6e-25 seq2887 132 6e-25 seq9159 125 9e-23 seq3654 111 2e-18 seq2367 91.5 2e-12 seq11470 87.8 2e-11 seq2171 87.8 2e-11 seq1605 87.8 2e-11 >seq15219 Length=8991 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| |||||||||||| |||||||| |||||||| | || Sbjct 1437 GCTTGGCCAGCTCTCCAGGCAGGATCAGGCGCACTGCGGTCTGAATCTCGCGAGAAGTGA 1496 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | |||| ||| |||||| || | || |||| | Sbjct 1497 TGGTGGGCTTCTTGTTGTAGCGAGCCAAGCGGGATGCCTCGCTGGCAATCTTCTCGAAGA 1556 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| |||||| || ||| |||| Sbjct 1557 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTTGAGGAGATACCAGTGTCTGGGT 1616 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||||||||| Sbjct 1617 GCACCTGCTTGAGCACCTTGTAGATG 1642 >seq8947 Length=2826 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| ||||| |||||| |||||||| |||||||| | || Sbjct 348 GCTTGGCCAGCTCTCCAGGCAGGATCAAGCGCACTGCGGTCTGAATCTCGCGAGAAGTGA 289 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | ||||| ||| |||||| || | || |||| | Sbjct 288 TGGTGGGCTTCTTGTTGTAGCGAGCCAGGCGGGATGCCTCGCTGGCAATCTTCTCGAAGA 229 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| |||||| || ||| |||| Sbjct 228 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTTGAGGAGATACCAGTGTCAGGGT 169 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||||||||| Sbjct 168 GCACCTGCTTGAGCACCTTGTAGATG 143 >seq10231 Length=4455 Score = 132 bits (146), Expect = 6e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| |||||||||||| |||||||| |||||||| | || Sbjct 348 GCTTGGCCAGCTCTCCAGGCAGGATCAGGCGCACTGCGGTCTGAATCTCGCGAGAAGTGA 289 Query 1254403 TCGTGTTGCG-CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATC 1254461 | || | || |||||| || | ||||| ||| || ||| || | || |||| Sbjct 288 TGGT-TGGCTTCTTGTTGTAGCGAGCCAGGCGGGATGCTTCGCTGGCAATCTTCTCGAAG 230 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| ||||| | ||| |||||| || ||| ||| Sbjct 229 ATGTCGTTGATGAATGAGTTCATGATAGACATAGCCTTTGAGGAGATACCAGTGTCTGGG 170 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| |||||| Sbjct 169 TGCACCTGCTTGAGCACCTTATAGATG 143 >seq2887 Length=2223 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| |||||| ||||| ||||||||||||||||| | || Sbjct 1780 GCTTGGCCAGCTCTCCTGGCAGGATCAGACGCACAGCGGTCTGGATCTCGCGAGAAGTGA 1839 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | ||||| ||| |||||| || | || |||| | Sbjct 1840 TGGTGGGCTTCTTGTTGTAGCGAGCCAGGCGGGATGCCTCGCTGGCAATCTTCTCGAAGA 1899 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| |||||| || ||| |||| Sbjct 1900 TGTCGTTGATGAAGGAGTTCATGATGGACATAGCCTTTGAGGAGATACCAGTGTCTGGGT 1959 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||||||| || ||| Sbjct 1960 GCACCTGCTTGAGCACCTTATATATG 1985 >seq9159 Length=2836 Score = 125 bits (138), Expect = 9e-23 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| | || || || | ||||| | || ||||| |||| |||||| ||||| | || Sbjct 1228 TATGCAATCCCTCATCTCTGCTGATGAGCTCATTGCTGAAGGTGAGGCCAGGCATCAAGC 1169 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | |||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| || | Sbjct 1168 CACGCTTCTTGAGCCAGAAGATGGCACAGAAGCTGCCTGAGAAGAAGATGCCCTCCACAG 1109 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTC 869325 | ||| | | | | |||||||||||| |||| Sbjct 1108 CAGCATATGCCACCAAGCGCTCGGCAAAGCTGTC 1075 Score = 91.5 bits (100), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 868747 GATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGA 868806 ||| | ||||||||| || || || | || ||||||||||| || || |||| Sbjct 1749 GATGATCTCCATCCAATCAAATGGATTTGCTGTTTTGTAGTGCTTCTCATTGCCAAGCGC 1690 Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 | | ||||| | ||| || |||||||||||||| | || |||||| | |||||||||| Sbjct 1689 CACTAGCAGCCTGTCTGCCACAAACTCGATGTAGTTGCTCATGAGCTTGCCGTTCATGCC 1630 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 |||| | || || || | || | ||||||||| | ||| || || ||||| Sbjct 1629 AATGACATCTACTGGAAGTGCATCACACACAAACTCCTGCTCAATGGTCACAGCCTCAGT 1570 Query 868927 GATGATCT 868934 |||||||| Sbjct 1569 GATGATCT 1562 >seq3654 Length=3311 Score = 111 bits (122), Expect = 2e-18 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || | || || || || || || |||||||||||||||||||||||||| | Sbjct 1443 TCCAGAGGCCATAGAACAGATCACGGGCACGGTTCTCCTCCTTGCCGTGGTTCTTGCGCA 1502 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 |||| || |||| | ||||| |||||||| ||||| | ||| ||| ||||| |||| Sbjct 1503 GGTCAAGGAAGTCAAAGATGTCTGCGTGCCAGGGCTCAATATAGATGGCGAAGGCACCCT 1562 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||||||| ||||| Sbjct 1563 TGCGCTTGCCACCGCC 1578 >seq2367 Length=7310 Score = 91.5 bits (100), Expect = 2e-12 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 1627326 CAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTT 1627385 |||||| ||||||| || || || || || || | ||| |||||| ||||||||| Sbjct 363 CAGGTGCTGGTTGACAACTGTGAACTCTCCAGACAACACACGGCGCACATAGATGTTGGA 304 Query 1627386 GGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCAT 1627445 ||| | ||| | |||| |||||||||||||||| || |||| |||||||| Sbjct 303 TGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCTGGCTGTGGGCAT 244 Query 1627446 GAGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCAGCGCGT 1627504 | || || || || |||||||| | |||||||| | || | | | ||||| | | Sbjct 243 CGGGGCAACAAGCAGTGAGTTGCGGACACCGTGCTGCTTGATGT-TCTCACGCAGTTCAT 185 Query 1627505 CCCAGTCCCAGCGGCCGCT 1627523 |||||| |||||| || || Sbjct 184 CCCAGTTCCAGCGACCACT 166 >seq11470 Length=8557 Score = 87.8 bits (96), Expect = 2e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||||||||| | |||||| || ||||| | |||||||| || ||| Sbjct 2847 GCCTTCTGGTACTCGCCCACTCTCCGCTCAAAGAAGTTTGCCTTGCCCTGTAGACTGATG 2906 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||||||| || ||||||| | || || |||| | | | || |||| | Sbjct 2907 AGCTCCATCCAGTCAAAGGGGTTGGTGCTGTTATACAGCTTGTTGTAGCCCAGCGCAACA 2966 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 ||||||||||| || ||| || |||||| || ||| ||| | | |||||||| Sbjct 2967 AGCAGGCGGTCTGCTACATACCTGATGTAGTGCGCCATAAGGTCACCATTCATGCC 3022 >seq2171 Length=3594 Score = 87.8 bits (96), Expect = 2e-11 Identities = 129/172 (75%), Gaps = 13/172 (8%) Strand=Plus/Plus Query 82764 AGTGGCGGAAATGACGCGTGCCGGTAAAGACCATGGCAACGCCGGCCGCGTCGCAGACGG 82823 |||| ||||| |||||| | ||||| |||||||| || | ||||||||| ||| | || Sbjct 389 AGTGCCGGAAGTGACGCATTCCGGTGAAGACCATCGCGAGGCCGGCCGCATCG--GCCGC 446 Query 82824 CGATCGAGGGCTT-GTCGCCGGCGCG-CGAGCCGCCCGGCTGCACGATGGCGACGACGCC 82881 || ||| | ||| |||| || ||| ||||||||||||||| | | || || |||| Sbjct 447 CG--CGATGACTTCGTCGTCG-CGCATCGAGCCGCCCGGCTGGATCA--CCGCCGTCGCC 501 Query 82882 GCCGGCGATGGCCTTG--CTCG-GCCCGTCGGGAAAGGGAAAGTAGGCGTCG 82930 |||||| | || | |||| ||||||||| ||||| ||| |||||||| Sbjct 502 -CCGGCGGCGACCGCGGCCTCGAGCCCGTCGGCGAAGGGGAAGAAGGCGTCG 552 >seq1605 Length=2286 Score = 87.8 bits (96), Expect = 2e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241 || |||||||||||||||||||||||||||||||||| |||||| || | | || Sbjct 2033 GTCGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGGCGACGCGACCAACGGCCGCGCG 2092 Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGTG 344301 ||| |||||| | | ||||||||| || || ||||||| | || |||||||| Sbjct 2093 GTGGCCGGCATCTACGCCGCCAAGGGCCGGCCGTCGTTCAACCCGCTGATCGTGCACGTC 2152 Query 344302 GCC 344304 ||| Sbjct 2153 GCC 2155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105807700518325