Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq13239 280 7e-71 seq106 264 6e-66 >seq13239 Length=1369 Score = 280 bits (310), Expect = 7e-71 Identities = 482/694 (69%), Gaps = 17/694 (2%) Strand=Plus/Minus Query 67574 ACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTA 67633 ||||||||| | | || ||| ||| ||||||||||| || | || | |||||| || Sbjct 713 ACCGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGCTTGCCCAAGGGCCGCGTG 654 Query 67634 GTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCC 67693 | ||| |||| || || || || || ||| | ||| | ||||| | | ||| Sbjct 653 ATCGAGGTCTATGGCCCGGAAAGCTCGGGCAAGACGACGCTCGCGCTCCATGTCATCGCC 594 Query 67694 AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCT 67753 | || |||||||| || |||| ||| |||| | |||| ||||||||| | ||||| || Sbjct 593 GAGGCGCAGAAGGCGGGCGGCACCGCGGCCTTCGTCGATGCCGAACATGCGCTCGATCCG 534 Query 67754 GAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACT 67813 | || ||| | ||||||||| || ||||| | || | ||| |||||| ||||| Sbjct 533 GTCTATGCCAAGAAGCTCGGGGTCGACATCGACGAGCTGATCGTTTCGCAGCCCGACACC 474 Query 67814 GGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATC 67873 ||||| ||||| || |||||| ||| || || || || | | | | | Sbjct 473 GGCGAACAGGCGCTCGAGATCACCGACACGCTGGTGCGCTCGAACGCGATCGACGTGCTG 414 Query 67874 GTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGAC 67933 || || ||||| |||||||| ||||||||||| || ||| |||| || || || || || Sbjct 413 GTGGTCGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAGATCGAGGGCGAGATGGGCGAT 354 Query 67934 TCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACG 67993 ||||||||||||||||| ||||| |||||| ||| | ||||||||||||||||| || Sbjct 353 TCGCACGTCGGCCTGCAGGCCCGGCTGATGAGCCAGTCGCTGCGCAAGCTGACCGGCTCG 294 Query 67994 ATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGC 68050 || | || | || || | | | | | | || ||||||||| |||| |||| Sbjct 293 ATCAACCGCTCGAAGTGCATGGTGA---TCTTCATCAACCAGCTGCGCATGAAGCTCGG- 238 Query 68051 AACGTGGGCTACGGCCCGAAT---GAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTAC 68107 ||| |||||| ||| |||||||| ||||| || || || || ||||| Sbjct 237 --GGTGATGTACGGC---AATCCCGAGACCACGACCGGCGGCAACGCACTCAAGTTCTAT 183 Query 68108 GCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGA-GAAGGAAGGCGATGAGGCTGT 68166 || ||||| | || ||||| | | || | | || ||||| |||| ||| | Sbjct 182 GCGAGCGTGCGGCTCGACATCCGCCGCACCGGC-CAGATCAAGGACCGCGACGAGATCAT 124 Query 68167 CGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGC 68226 ||||||| ||||||||||||||| |||||||||||| | ||||| || | |||| Sbjct 123 CGGCAACACCACGCGCGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCCTTCAAGCAGGT 64 Query 68227 TGAGTTTTCCATCGTCTACGGCGAGGGCATTTCC 68260 ||||| |||| | |||||||||||||| ||| Sbjct 63 CGAGTTCGACATCATGTACGGCGAGGGCATCTCC 30 >seq106 Length=4709 Score = 264 bits (292), Expect = 6e-66 Identities = 517/760 (68%), Gaps = 13/760 (2%) Strand=Plus/Minus Query 67572 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 67631 |||| |||||| | | || ||| ||| ||||||||||| ||| ||| | || || Sbjct 3597 CCACGGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGGCTGCCGCGCGGGCGCA 3538 Query 67632 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 67691 | || ||||||||||| || || || || || ||| | ||| | || || |||||| Sbjct 3537 TCGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTGCATACGGTGG 3478 Query 67692 CCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACC 67751 || | || |||||| ||| |||| | ||||| |||||||||||| || | ||||||| Sbjct 3477 CCGAGGCGCAGAAGCGCGGCGGCATCTGCGCCTTCATCGACGCCGAGCACGCGCTCGACC 3418 Query 67752 CTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACA 67811 | |||||| |||||| || | ||||| | ||| || | |||||| ||| Sbjct 3417 CGATCTACGCCCGCAAGCTCGGCGTCAACCTCGACGACCTCCTGATCTCGCAGCCGGACG 3358 Query 67812 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCA 67871 | ||||||||||| || |||||| ||| || || || || | || | | Sbjct 3357 CCGGCGAGCAGGCGCTCGAGATCTGCGACACGCTGGTGCGCTCGGGTGCCGTCGACGTGC 3298 Query 67872 TCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGG 67931 |||| || || || || ||||| ||| ||||||||| |||||||| || || || || | Sbjct 3297 TCGTCGTCGATTCGGTCGCGGCGCTGACGCCGCGGGCCGAGCTCGAGGGCGAGATGGGTG 3238 Query 67932 ACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCA 67991 | |||| ||||||||| || ||||||||| ||||| |||||||||| |||| | Sbjct 3237 ATTCGCTGCCCGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGCCT 3178 Query 67992 CGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA 68051 |||| | | | || || | | | | || ||| | || ||||||||| Sbjct 3177 CGATCTCGAAGTCGAAGACCATGGTGATCTTCATCAACCAGATCCGGATGAAGATCGG-- 3120 Query 68052 ACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCT 68111 |||| | |||| ||||||||||| || || || || || |||||||||| Sbjct 3119 -CGTGATGTTCGGCAGCCCCGAGACCACCACGGGCGGCAACGCGCTCAAGTTCTACGCCT 3061 Query 68112 CGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 68171 | || || | || |||| | |||| | | |||| |||| |||| ||||||| Sbjct 3060 CCGTCCGCCTCGACATCCGTCGCATCGGCGCGATCAAGGCGCGCGACGAGGTCGTCGGCA 3001 Query 68172 ACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGT 68231 ||| || ||||| ||||| || ||||||||||| || || ||| |||| || |||| Sbjct 3000 ACCAGACCCGCGTCAAGGTGGTGAAGAACAAGCTCGCCCCGCCGTTCCGCGAGATCGAGT 2941 Query 68232 TTTCCATCGTCTACGGCGAGGGCATTTC-CCGCGAGGCCGAACTCCTCGACATGGCCGTT 68290 | |||| | |||||||||||||| || || || ||| ||| |||| | | ||| Sbjct 2940 TCGACATCATGTACGGCGAGGGCATCTCGAAGCTCGG-CGAGCTCGTCGATCTCGGCGT- 2883 Query 68291 TCCCGAGGGC----TCATCAAGAAGTCTGGGGCCTGGTTC 68326 | ||| | ||||| | ||||| || ||||||||| Sbjct 2882 ---CAAGGCCGGCATCATCGACAAGTCCGGCGCCTGGTTC 2846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247400668774800