Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_022065.1 Length=74533 Score E Sequences producing significant alignments: (Bits) Value seq106 361 3e-95 seq13239 269 1e-67 >seq106 Length=4709 Score = 361 bits (400), Expect = 3e-95 Identities = 536/757 (71%), Gaps = 7/757 (1%) Strand=Plus/Minus Query 65043 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65102 |||| ||||| ||| || ||| ||| || |||||||| ||| ||| | || || Sbjct 3597 CCACGGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGGCTGCCGCGCGGGCGCA 3538 Query 65103 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 65162 | || || |||||||| || ||||| || || ||| | || || || || |||||| Sbjct 3537 TCGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTGCATACGGTGG 3478 Query 65163 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 65222 || | ||||||||| ||| |||| | ||||| ||||||||| |||||| | || |||| Sbjct 3477 CCGAGGCGCAGAAGCGCGGCGGCATCTGCGCCTTCATCGACGCCGAGCACGCGCTCGACC 3418 Query 65223 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 65282 | |||||| |||||| || |||||||| ||||| || | ||||||||| Sbjct 3417 CGATCTACGCCCGCAAGCTCGGCGTCAACCTCGACGACCTCCTGATCTCGCAGCCGGACG 3358 Query 65283 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--T 65340 | ||||||||||| || |||||| ||| || || || || | | ||| | | Sbjct 3357 CCGGCGAGCAGGCGCTCGAGATCTGCGACACGCTGGTGCGCTCGGGTG--CCGTCGACGT 3300 Query 65341 CGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGG 65400 ||||||| || || || ||||| ||| |||||| ||||||||||| ||||| || || Sbjct 3299 GCTCGTCGTCGATTCGGTCGCGGCGCTGACGCCGCGGGCCGAGCTCGAGGGCGAGATGGG 3240 Query 65401 GGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 65460 || | ||||||||| |||||||| ||| ||||| ||||||||||||||| Sbjct 3239 TGATTCGCTGCCCGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGC 3180 Query 65461 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 65520 | | ||||| | | || || || | ||| |||||||| | || ||||||||| Sbjct 3179 CTCGATCTCGAAGTCGAAGACCATGGTGATCTTCATCAACCAGATCCGGATGAAGATCGG 3120 Query 65521 CAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGC 65580 | || | | |||| |||||||||||||||||||| || | | ||||||||| Sbjct 3119 CGTGATGTTCGGCAGCCCC---GAGACCACCACGGGCGGCAACGCGCTCAAGTTCTACGC 3063 Query 65581 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGG 65640 ||| |||||| | || |||||||||||| | | |||| |||| |||| ||||| Sbjct 3062 CTCCGTCCGCCTCGACATCCGTCGCATCGGCGCGATCAAGGCGCGCGACGAGGTCGTCGG 3003 Query 65641 CAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGA 65700 ||||| ||||| || ||||| || ||||||||||| ||||||||| |||| | ||| Sbjct 3002 CAACCAGACCCGCGTCAAGGTGGTGAAGAACAAGCTCGCCCCGCCGTTCCGCGAGATCGA 2943 Query 65701 GTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGT 65760 |||| | || ||||||| |||||||||||| | ||| ||| |||| || | ||| Sbjct 2942 GTTCGACATCATGTACGGCGAGGGCATCTCGAAGCTCGGCGAGCTCGTCGATCTCGGCGT 2883 Query 65761 GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 65797 | ||| | | | ||||| |||||||||||| Sbjct 2882 CAAGGCCGGCATCATCGACAAGTCCGGCGCCTGGTTC 2846 >seq13239 Length=1369 Score = 269 bits (298), Expect = 1e-67 Identities = 519/759 (68%), Gaps = 26/759 (3%) Strand=Plus/Minus Query 64985 TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAGCCACAGACTGTGGACGTC------ 65038 |||||| || ||||| ||||||||||| ||| |||| || | ||| Sbjct 776 TTCGGCAAGGGTTCGGCGATGAAGCTGGGCTCGAAGG---AGACGATGCAGGTCGAGGCG 720 Query 65039 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 65098 || | |||||||| ||| || ||| ||| || |||||||| || | || | |||| Sbjct 719 ATCTCGACCGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGCTTGCCCAAGGGC 660 Query 65099 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 65158 || ||| | || |||| ||||| ||| || || ||| | || || ||||| | Sbjct 659 CGCGTGATCGAGGTCTATGGCCCGGAAAGCTCGGGCAAGACGACGCTCGCGCTCCATGTC 600 Query 65159 GTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTG 65218 | ||| | ||||||||||| || |||| ||| |||| | |||| || || || | || Sbjct 599 ATCGCCGAGGCGCAGAAGGCGGGCGGCACCGCGGCCTTCGTCGATGCCGAACATGCGCTC 540 Query 65219 GACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCG 65278 || || | || |||||| |||||| || ||| ||||| | || | || ||||| Sbjct 539 GATCCGGTCTATGCCAAGAAGCTCGGGGTCGACATCGACGAGCTGATCGTTTCGCAGCCC 480 Query 65279 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 65338 ||||| ||||| ||||| || |||||| ||| || || || || | | | Sbjct 479 GACACCGGCGAACAGGCGCTCGAGATCACCGACACGCTGGTGCGCTCGAACGCGATCGAC 420 Query 65339 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 65398 | | || || ||||| |||||||| |||||||||||||||||| |||| ||||| || Sbjct 419 GTGCTGGTGGTCGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAGATCGAGGGCGAGATG 360 Query 65399 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACC 65458 || || |||||||||||||| || || || ||| ||| | |||||||||| ||| Sbjct 359 GGCGATTCGCACGTCGGCCTGCAGGCCCGGCTGATGAGCCAGTCGCTGCGCAAGCTGACC 300 Query 65459 GGCACCATCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 65515 ||| | ||| | || | || || | ||| ||| |||||||| ||||| |||| Sbjct 299 GGCTCGATCAACCGCTCGAAGTGCATGGTGA---TCTTCATCAACCAGCTGCGCATGAAG 243 Query 65516 ATCGGCAACGTGGGCTACGGCCCGAAT---GAGACCACCACGGGCGGCAAGGCTTTGAGG 65572 |||| ||| |||||| ||| |||||||| || |||||||| || | | | Sbjct 242 CTCGG---GGTGATGTACGGC---AATCCCGAGACCACGACCGGCGGCAACGCACTCAAG 189 Query 65573 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGATGA 65631 ||||| || || || | || |||| |||| || | | || ||||| |||| || Sbjct 188 TTCTATGCGAGCGTGCGGCTCGACATCCGCCGCACCGGC-CAGATCAAGGACCGCGACGA 130 Query 65632 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 65691 | |||||||| ||| || |||||||| |||||||||||| | || ||||| | Sbjct 129 GATCATCGGCAACACCACGCGCGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCCTTCAA 70 Query 65692 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTC 65730 | | ||||||| | || ||||||| ||||||||||| Sbjct 69 GCAGGTCGAGTTCGACATCATGTACGGCGAGGGCATCTC 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238333662059150