Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq6492 159 2e-34 >seq6492 Length=3580 Score = 159 bits (176), Expect = 2e-34 Identities = 208/280 (74%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 95866 CTCGGCGTGGCGCACGCCG-GCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCCACGG 95924 |||| || |||||||||| ||||| ||||| | ||| ||||| ||||||||| ||| Sbjct 2770 CTCGATGTTGCGCACGCCGAGCTTCGA-CATCTTCTTGTAGCGGTCCTCCATCTCC-CGG 2827 Query 95925 TGAG-CCACCGCAGCGTCTTAACCGCCT-CGTCGGGCTCGGTGACCACCGGCTGCAAAAG 95982 | |||| ||||| | ||||||| | ||||| ||||||||||||||| || ||| Sbjct 2828 ACCGTCCACTTCAGCGCCACCACCGCCTTCTTCGGG-TCGGTGACCACCGGCGTCAGAAG 2886 Query 95983 GTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTT 96042 ||| ||||| |||| ||| | ||| |||| ||||||||||||||||||||| ||| Sbjct 2887 GTGCGGGATGCCGTCGTAGACCGAGAGCTCCAGCATCTTCGGGTCGATCATGATCAGCCG 2946 Query 96043 GACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGA 96102 | | | || || | |||||||||| || | | ||||| |||||| | || Sbjct 2947 GCACTGCTCCGGCGTCAGCCGGTAGAGCAGCGACAGGATCATCGTGTTGATCGACACCGA 3006 Query 96103 CTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGC 96142 ||||||||| ||||||| ||| || ||||||| ||| ||| Sbjct 3007 CTTGCCCGAGCCGGTGGTGCCGGCGACCAGCATGTGCGGC 3046 Score = 100 bits (110), Expect = 2e-16 Identities = 177/254 (70%), Gaps = 7/254 (3%) Strand=Plus/Plus Query 95597 AGCTGCTCGGCTCCACCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGA--TGCTGTGG 95654 ||||||||||| || |||| | ||||| ||||| ||| || | || || || Sbjct 2387 AGCTGCTCGGCGCCCTGCTCGCCGAGGATGGTGCGGCTGTCGATGCGCGAGGTGACCTG- 2445 Query 95655 CGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGG 95714 ||| |||| | | ||| | ||| | ||||| ||| |||| || || || |||| Sbjct 2446 -GAAGGAGACGCGCGTCGGGAAGTTCGCCTTGATCGTGCCGGTGATGACGTCGACCGAGG 2504 Query 95715 GCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGA 95774 | ||||||||||||| || || || |||||||| ||||||||| |||| |||| || Sbjct 2505 GACGCTGCGTCGCCATGATGACGTGGATGCCGGCGGCGCGCGCCATCTGCGCGAGCCGCT 2564 Query 95775 CAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGA 95834 | || |||||| || | |||| | | ||||||| ||||| |||| |||||||| Sbjct 2565 GCACCGTGCCCTCGA--TC-TCCTTGCCGGCCACCATCATCAGGTCGGCCATCTCGTCGA 2621 Query 95835 CCACTACCACGATG 95848 | || |||||| Sbjct 2622 TGATGACGACGATG 2635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351677644739225