Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq7611 152 8e-32 seq13998 89.7 8e-13 >seq7611 Length=695 Score = 152 bits (168), Expect = 8e-32 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 35454 GTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCC 35513 ||||| || ||| ||| |||||| || ||||||||||||| || |||||| | Sbjct 267 GTCACTCCGCGCTGACCCATGTATTTGCCTGCGCGATCCTTGTAGCTGACCTCGCAGCGC 208 Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 |||| | || | ||||| | ||| | || ||||| ||||| | ||||||| Sbjct 207 TCGTTGCCCTGAAGGAACAGGAACTGGCAGGCGCCCTCGTTGGCGTAGATCTTCGCCGGC 148 Query 35574 AGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGC 35633 || || ||||| ||| ||||| |||||||| |||||||| | || ||||||||| Sbjct 147 AGCGGCGTGGTGTTCGAGAATTCCAGCGTCACATGGCCTTCCCAGCCCGGCTCCAGCGGC 88 Query 35634 GTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGG 35693 |||||||| |||||||| || |||||||| ||||||||||| || | || | ||| || Sbjct 87 GTCACGTTCACGATGATCCCGCAGCGCGCATAGGTGCTCTTGCCGAGGCAGATCACCAGC 28 Query 35694 ACGTTGCGCGGAATGCGGAAGTATTCG 35720 |||| || | ||||||||||||| Sbjct 27 ACGTCCTCGGGCACGCGGAAGTATTCG 1 >seq13998 Length=1233 Score = 89.7 bits (98), Expect = 8e-13 Identities = 74/88 (84%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 ||||| |||||||| |||||||||| |||| |||||||||| || | ||||||||||| Sbjct 342 GCCGGCTTAGCTCAGATGGTAGAGCACCTGATTTGTAATCAGGGGGCCGCGGGTTCGATC 401 Query 120288 CCTGATGCCGGCACCATATTCTCTGGAG 120315 |||| |||||||||| ||| |||||| Sbjct 402 CCTGCAGCCGGCACCA-CTTC-CTGGAG 427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825749293749000