Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2887 178 2e-38 seq15219 174 2e-37 seq8947 174 2e-37 seq10231 168 1e-35 seq3654 132 8e-25 seq9159 120 5e-21 seq1605 100 5e-15 seq2267 91.5 2e-12 seq1610 89.7 8e-12 seq3942 87.8 3e-11 seq2367 87.8 3e-11 >seq2887 Length=2223 Score = 178 bits (196), Expect = 2e-38 Identities = 184/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 1741 TGAACTTGGTCACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCTCCTGGCA 1800 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||||| ||||| ||||||||||||||||| | ||| ||| |||||| || Sbjct 1801 GGATCAGACGCACAGCGGTCTGGATCTCGCGAGAAGTGATGGTGGGCTTCTTGTTGTAGC 1860 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || | || |||| |||||||||| || ||||||| Sbjct 1861 GAGCCAGGCGGGATGCCTCGCTGGCAATCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 1920 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | || |||||| || ||| ||||||||||||||||||||||| | Sbjct 1921 TGATGGACATAGCCTTTGAGGAGATACCAGTGTCTGGGTGCACCTGCTTGAGCACCTTAT 1980 Query 1485710 A 1485710 | Sbjct 1981 A 1981 >seq15219 Length=8991 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||| ||||| || || |||||| ||||||| || || ||| Sbjct 1398 TGAACTTGGTCACAGCCTTGGTGCCCTCAGACACAGCGTGCTTGGCCAGCTCTCCAGGCA 1457 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||||||||||| |||||||| |||||||| | ||| ||| |||||| || Sbjct 1458 GGATCAGGCGCACTGCGGTCTGAATCTCGCGAGAAGTGATGGTGGGCTTCTTGTTGTAGC 1517 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| |||||| || | || |||| |||||||||| || ||||||| Sbjct 1518 GAGCCAAGCGGGATGCCTCGCTGGCAATCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 1577 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | || |||||| || ||| ||||||||||||||||||||||||| Sbjct 1578 TGATGGACATGGCCTTTGAGGAGATACCAGTGTCTGGGTGCACCTGCTTGAGCACCTTGT 1637 Query 1485710 A 1485710 | Sbjct 1638 A 1638 >seq8947 Length=2826 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||| ||||| || || |||||| ||||||| || || ||| Sbjct 387 TGAACTTGGTCACAGCCTTGGTGCCCTCAGACACAGCGTGCTTGGCCAGCTCTCCAGGCA 328 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| |||||| |||||||| |||||||| | ||| ||| |||||| || Sbjct 327 GGATCAAGCGCACTGCGGTCTGAATCTCGCGAGAAGTGATGGTGGGCTTCTTGTTGTAGC 268 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || | || |||| |||||||||| || ||||||| Sbjct 267 GAGCCAGGCGGGATGCCTCGCTGGCAATCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 208 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | || |||||| || ||| ||||||||||||||||||||||||| Sbjct 207 TGATGGACATGGCCTTTGAGGAGATACCAGTGTCAGGGTGCACCTGCTTGAGCACCTTGT 148 Query 1485710 A 1485710 | Sbjct 147 A 147 >seq10231 Length=4455 Score = 168 bits (186), Expect = 1e-35 Identities = 184/242 (76%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||| ||||| || || |||||| ||||||| || || ||| Sbjct 387 TGAACTTGGTCACAGCCTTGGTGCCCTCAGACACAGCGTGCTTGGCCAGCTCTCCAGGCA 328 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC-GCTTGTTAGTG 1485588 |||||||||||| |||||||| |||||||| | ||| || | || |||||| | Sbjct 327 GGATCAGGCGCACTGCGGTCTGAATCTCGCGAGAAGTGATGGT-TGGCTTCTTGTTGTAG 269 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || ||||||||| || ||| || | || |||| |||||||||| || |||||| Sbjct 268 CGAGCCAGGCGGGATGCTTCGCTGGCAATCTTCTCGAAGATGTCGTTGATGAATGAGTTC 209 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| | || |||||| || ||| ||||||||||||||||||||||| Sbjct 208 ATGATAGACATAGCCTTTGAGGAGATACCAGTGTCTGGGTGCACCTGCTTGAGCACCTTA 149 Query 1485709 TA 1485710 || Sbjct 148 TA 147 >seq3654 Length=3311 Score = 132 bits (146), Expect = 8e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859 |||||| || ||||| ||||| || || |||||| | | | |||| || Sbjct 1366 CAGGCCTGGAGCCTCATTGGGGCAGAACAGACTCCAGTCTTGGTCCTGCTCCACTCGCTT 1425 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| ||||| || |||| ||||| || || ||||| || || |||||||||||||| Sbjct 1426 CATGAACAGATCATTGATCCAGAGGCCATAGAACAGATCACGGGCACGGTTCTCCTCCTT 1485 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| |||||| || |||| | || ||| |||||||| ||||| | || Sbjct 1486 GCCGTGGTTCTTGCGCAGGTCAAGGAAGTCAAAGATGTCTGCGTGCCAGGGCTCAATATA 1545 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||| ||||| |||||||||||||| ||||| Sbjct 1546 GATGGCGAAGGCACCCTTGCGCTTGCCACCGCC 1578 >seq9159 Length=2836 Score = 120 bits (132), Expect = 5e-21 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 794353 CTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 794412 ||||| | || ||||| ||| |||||| ||||| | ||| |||||||||||||| ||| Sbjct 1208 CTGATGAGCTCATTGCTGAAGGTGAGGCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAG 1149 Query 794413 ATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGC 794472 ||||||||||| ||||| ||||| ||||||||||| || || ||| | | || | ||| Sbjct 1148 ATGGCACAGAAGCTGCCTGAGAAGAAGATGCCCTCCACAGCAGCATATGCCACCAAGCGC 1089 Query 794473 TCGGCAAAAGTGTC 794486 |||||||| |||| Sbjct 1088 TCGGCAAAGCTGTC 1075 >seq1605 Length=2286 Score = 100 bits (110), Expect = 5e-15 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 2233081 CGGCGAGTTGGTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGTC 2233140 |||||| | |||||||| ||||||||||||||||| |||||||||| ||||||| | Sbjct 2023 CGGCGACCTCGTCGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGGCGACGCGACCAA 2082 Query 2233141 AGACGAGGCCGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCAT 2233200 | | || || |||||| | |||||||||||| ||||| ||||||| | || Sbjct 2083 CGGCCGCGCGGTGGCCGGCATCTACGCCGCCAAGGGCCGGCCGTCGTTCAACCCGCTGAT 2142 Query 2233201 CGTGCACGTGGCC 2233213 ||||||||| ||| Sbjct 2143 CGTGCACGTCGCC 2155 >seq2267 Length=17667 Score = 91.5 bits (100), Expect = 2e-12 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || ||||| || ||||| || || || ||| |||| || || || ||| Sbjct 15584 TGAACTTGGTTACAGCCTTTGTGCCCTCAGACACAGCATGCTTGGCAAGCTCTCCTGGCA 15525 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC-GCTTGTTAGTG 1485588 |||| ||||| || |||||||||||||| | ||| || | || |||||| | Sbjct 15524 GAATCAATCGCACAGCAGTCTGGATCTCGCGAGACGTGATGGT-TGGCTTCTTGTTGTAG 15466 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || || || | || ||| || | | || |||| |||||||||| || |||||| Sbjct 15465 CGAGCAAGCCTGCTGGCTTCAGAAGCAATCTTCTCGAAGATGTCGTTGATGAAGGAGTTC 15406 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCC 1485677 ||||| ||||| | ||| | |||||| Sbjct 15405 ATGATAGACATGGCCTTGGAGCTGATGCC 15377 >seq1610 Length=2435 Score = 89.7 bits (98), Expect = 8e-12 Identities = 184/266 (69%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 118624 GCACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCG 118683 |||||||||||||| || |||| ||| | |||||| || || |||||||||||| Sbjct 1862 GCACGCCGCGCATGGTCATGCACTGGTGCTCGGCCTCGATCATCACCGCGACGCCGCGCG 1921 Query 118684 -CGCCCGTGACCTCGCTGAT-GCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTG 118741 | | | | | ||| ||| || || | | | ||| ||| || ||||||| ||| Sbjct 1922 GCTTCAGCGTC-TCGTCGATCGCGCT-GACCACCTGCGCCGTCAGGTTCTCCTGCGTCTG 1979 Query 118742 GAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGAT-CCTGC 118800 | ||| ||||| ||| |||| ||| | || |||| || || | || || | Sbjct 1980 CAGGCGTCGCGAGAAGGCGTCCACGACGCGGGCGAGCTTGGAGAGCCCCACGACGCCCTC 2039 Query 118801 CCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACA 118860 | |||| || ||||| | ||||||||||||||| || |||| || ||||||||||| Sbjct 2040 GCTCGGGTAG-TAGCCGATGTGCGCCTTGCCGATGAACGGCACCATGTGGTGCTCGCAGT 2098 Query 118861 TGGAGAAAAAGTCAATGTCGCGCACG 118886 ||||| || |||||||||||| Sbjct 2099 GCGAGAAGAACGGGATGTCGCGCACG 2124 >seq3942 Length=534 Score = 87.8 bits (96), Expect = 3e-11 Identities = 100/129 (78%), Gaps = 8/129 (6%) Strand=Plus/Plus Query 122738 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCT-GAGCGTGTGCTGCGCGCC 122796 ||||||||||| ||||||||||||||| |||||||||| || | || || | || ||| Sbjct 399 GCCGAGAACCTGATGATCGTCGACCTGATGCGCAACGATCTCGCCCGCGT-CGCCGAGCC 457 Query 122797 CGGCAGCGTCGTCGTACCGCCAGGTCGCCTCATGGCGATCGAGACCTATGCCGCCGTGCA 122856 ||||||||| || | ||| |||| | | ||| |||||| |||| || | ||||| Sbjct 458 CGGCAGCGTGCGGGT----CGAGG-CGCC-CTTCGCGGTCGAGAGCTATCCCCCGGTGCA 511 Query 122857 CCAGATGGT 122865 ||||||||| Sbjct 512 CCAGATGGT 520 >seq2367 Length=7310 Score = 87.8 bits (96), Expect = 3e-11 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 2069595 CAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCT 2069654 |||||| ||||||| || || || || || || | ||| |||||| ||||||||| Sbjct 363 CAGGTGCTGGTTGACAACTGTGAACTCTCCAGACAACACACGGCGCACATAGATGTTGGA 304 Query 2069655 CGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCAT 2069714 ||| | ||| | |||| |||||||||||||||| || |||| |||||||| Sbjct 303 TGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCTGGCTGTGGGCAT 244 Query 2069715 GAGCGCCACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTC 2069774 | || || ||||| |||||||| | |||| ||| | | | ||||| | || Sbjct 243 CGGGGCAACAAGCAGTGAGTTGCGGACACCGTGCTGCTTGATGTTCTCACGCAGTTCATC 184 Query 2069775 CCAGTCCCAGCGGCCGCT 2069792 ||||| |||||| || || Sbjct 183 CCAGTTCCAGCGACCACT 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914520472747775