Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq759 100 8e-17 seq14914 87.8 5e-13 seq12750 84.2 6e-12 >seq759 Length=9036 Score = 100 bits (110), Expect = 8e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122 ||||||||||| |||| ||||||||| |||| ||||||||||||| |||||||||| Sbjct 975 TGGCGACCCCGGCAGGGCTCGAACCTGCGACCTGCCGCTTAGAAGGCGGCTGCTCTATCC 1034 Query 21123 AGCTGAGCTACGGGGCCG 21140 |||||||||||||||||| Sbjct 1035 AGCTGAGCTACGGGGCCG 1052 >seq14914 Length=1627 Score = 87.8 bits (96), Expect = 5e-13 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 23580 GAAGAACACGACGCGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTT 23639 ||||| | ||||| |||||||||||||||||||| |||||||||||| | |||||| Sbjct 21 GAAGATCGCGACGGTGTGCCATTCGGTCTTTTCCTGGCGCTCGCCGGTGTTGCGGTCCTT 80 Query 23640 CCAGGTTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCG 23699 ||| || || ||||| | || | ||||||||| ||||||| || | ||| Sbjct 81 CCACGTCTCGCTGGTGGCGATGCGCAGGTTGCAGACCTTGCCGCCGTTCTGGAACGTGCG 140 Query 23700 CACTTCCGGGTCATTACCCAGGCGGCCAATCAG 23732 |||||||| || ||||| ||| ||||| Sbjct 141 GACTTCCGGATCGGCGCCCAGATTGCCGATCAG 173 >seq12750 Length=3634 Score = 84.2 bits (92), Expect = 6e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122 ||||| ||||||||||||||||||||||||| | ||| | ||| || ||||||||| Sbjct 443 TGGCGCACCCGACAGGATTCGAACCTGTGACCTCTGCCTTCGGAGGGCAACGCTCTATCC 384 Query 21123 AGCTGAGCTACGGG 21136 |||||||||||||| Sbjct 383 AGCTGAGCTACGGG 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139256364044700