Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq14742 466 2e-126 >seq14742 Length=52551 Score = 466 bits (516), Expect = 2e-126 Identities = 698/983 (71%), Gaps = 6/983 (1%) Strand=Plus/Plus Query 158805 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTACCCACTGCTTATCTTGCT 158864 || ||||| || ||||| || ||||| || ||||||||| | || ||||||| |||| Sbjct 37792 GACCGTTTTGTATTTGTAGGTTGGTCAGGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCA 37851 Query 158865 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCT 158924 |||| |||||| ||||||| || ||||| | || ||||| |||||||| | ||| Sbjct 37852 CTTGGAGGTTGGTTTACTGGTACAACTTTTGTAACATCATGGTACACACATGGTTTAGCT 37911 Query 158925 ACTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGCT 158984 |||| ||| | || ||| ||||| | |||||||| ||||| ||||| || | | Sbjct 37912 TCTTCATATTTAGAAGGTTGTAACTTCTTAACAGCAGCTGTTTCAACTCCTGCAAACAGT 37971 Query 158985 ATGGGTCATTCTCTTCTGCTTCTC-TGGGGTCCTGAGGCTCAAGGGGA-TTTCGTCAGGT 159042 |||| ||| ||| || | |||| ||||| ||||| || ||||| || ||| || | | Sbjct 37972 ATGGCTCACTCT-TTATTATTCTTATGGGGACCTGAAGCACAAGGTGACTTTACTC-GTT 38029 Query 159043 GGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTG 159102 || ||| | || || || |||| ||| | || | || || | || | |||||| Sbjct 38030 GGTGTCAATTAGGTGGTCTATGGACATTTATTGCTTTACATGGATCTTTCGGTTTAATTG 38089 Query 159103 GTTTCATGCTTCGCCAGTTTGAACTGGCACGTCTCA-TCGGTATCCGTCCCTACAATGCT 159161 | || ||| | || || |||||| | || ||| ||| | | | ||||| ||||||||| Sbjct 38090 GATTTATGTTACGTCAATTTGAAATTGCTCGT-TCAGTTAATTTACGTCCATACAATGCT 38148 Query 159162 ATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGT 159221 ||||| ||||| | |||||| | |||||||| || ||| | || |||||| | || Sbjct 38149 ATTGCTTTCTCGGCGCCTATTTCAGTTTTTGTTTCAGTTTTCTTAATTTACCCATTAGGA 38208 Query 159222 CAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTC 159281 || || | |||||||| ||||| ||||| || || || || ||| | ||| | | Sbjct 38209 CAATCTGGCTGGTTTTTTGCTCCTAGTTTTGGTGTAGCAGCTATTTTCCGTTTCATTTTA 38268 Query 159282 TTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGT 159341 || | ||||| ||||| || ||||| ||||||| ||||| |||||||| || || ||| Sbjct 38269 TTTTTCCAAGGCTTCCATAACTGGACTTTAAACCCATTCCACATGATGGGTGTAGCAGGT 38328 Query 159342 ATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATAC 159401 | |||| | || || ||| ||||||||| || | || |||||||| ||||||| Sbjct 38329 GTTTTAGGAGCTGCTCTATTATGTGCTATTCACGGTGCTACTGTTGAAAACACATTATTT 38388 Query 159402 GAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACT 159461 || ||||| || || ||||| || || ||| | |||| |||| || || ||| Sbjct 38389 GAAGATGGTGACGGTGCTAACACATTCCGTGCATTTAACCCAACACAAGCTGAAGAAACT 38448 Query 159462 TATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAAC 159521 || || ||||| || || ||||| |||||||| || || || || |||| || || || Sbjct 38449 TACTCAATGGTAACAGCGAACCGTTTCTGGTCTCAAATTTTTGGGGTTGCTTTCTCAAAT 38508 Query 159522 AAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGT 159581 || || |||||||| ||||| ||| | |||| |||||| | ||||| |||| || | Sbjct 38509 AAACGTTGGCTTCACTTCTTCATGCTTCTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCT 38568 Query 159582 ATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATC 159641 ||||| | |||| | ||| | ||| | |||||||| || ||||| ||||| || Sbjct 38569 ATTGGTGTAGTTGGGTTAGCTTTAAATTTACGTGCTTATGACTTCGTTTCACAAGAAATT 38628 Query 159642 AGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAA 159701 | ||||| || ||||| ||||| ||||| |||||||| || || ||| || | |||||| Sbjct 38629 CGTGCAGCTGAGGATCCGGAATTCGAAACTTTCTACACAAAAAATATTATTTTAAATGAA 38688 Query 159702 GGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAA 159761 || | ||||||||| |||| | || ||||| |||||| | | ||||| ||| Sbjct 38689 GGTATCCGTGCTTGGATGGCTGCGCAAGACCAACCACATGAACGTCTTGTATTCCCTGAA 38748 Query 159762 GAAGTTCTACCAAGAGGTAACGC 159784 ||||| |||| | ||||| || Sbjct 38749 GAAGTATTACCTCGTGGTAATGC 38771 Score = 273 bits (302), Expect = 2e-68 Identities = 269/345 (78%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 157078 AACCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCAACATTGCTTGCAGCAACT 157137 |||||||| || | |||||||||||||| | ||||| || ||||| | |||| ||| Sbjct 12244 AACCGTTTATACATCGGTTGGTTCGGTGTTATCATGATCCCTACATTATTAACAGCTACT 12185 Query 157138 ATCTGC-TTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGA 157196 |||| ||||| | || ||| | || |||||||| ||||||||||| |||||||| || Sbjct 12184 -TCTGTATTCATCATCGCTTTCATCGCTGCACCTCCAGTTGATATCGATGGTATTCGTGA 12126 Query 157197 ACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTTC 157256 |||||| ||||||| | | || || |||||||||||||||||||| ||||||||| | Sbjct 12125 GCCAGTTTCTGGTTCATTATTATACGGAAACAACATCATCTCTGGTGCTGTTGTTCCTAC 12066 Query 157257 TTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTG 157316 |||||||| || ||| | || |||||||| || |||||||| |||| | |||||||| Sbjct 12065 ATCAAACGCTATTGGTTTACATTTCTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTG 12006 Query 157317 GCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTATGC 157376 | | |||||||||||||||| |||| | | || | |||||| | | || || | Sbjct 12005 GTTATACAACGGTGGTCCTTACCAATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTG 11946 Query 157377 CTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCG 157421 ||| ||||| ||||| |||||| | |||||||||||||||||||| Sbjct 11945 CTACATGGGTCGTGAATGGGAATTATCTTACCGTTTAGGTATGCG 11901 Score = 257 bits (284), Expect = 2e-63 Identities = 267/350 (76%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 157553 TCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTG 157612 |||| ||||| || |||||||| ||||||||||| || ||||||||| | || ||||||| Sbjct 9283 TCGTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTG 9224 Query 157613 GGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTG 157672 | ||||| ||||| || || |||||||| |||||||| | || ||||| || | Sbjct 9223 GTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAA 9164 Query 157673 TTCGTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAG 157732 | |||||||| ||||||| || || ||| | || ||||| |||||||||||||||| Sbjct 9163 TCCGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAG 9104 Query 157733 AGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTT 157792 | || |||||||| || |||||||| |||||||| || || | |||||||||||||||| Sbjct 9103 AAACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTT 9044 Query 157793 CATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCCTGTTGTCGGCATCT 157852 | ||||||||| | | ||||||||| | || || ||||| || || || || | Sbjct 9043 CTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTT 8984 Query 157853 GGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTC 157902 |||||||||| | || | || |||||||||||| | ||||| ||| Sbjct 8983 GGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 131 bits (144), Expect = 2e-25 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 157417 ATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTC 157476 ||||| || ||||| ||| || ||||| || ||||| || ||||| | |||||||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 157477 CTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 157536 || |||||||| |||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 157537 ACTTTTAACT 157546 ||||| |||| Sbjct 10357 ACTTTCAACT 10348 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 157901 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 157960 ||||||||||||| || | |||| ||| |||||||| || ||||| |||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 157961 TCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 158020 || | ||||| ||| | ||||||||||||||||| |||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 158021 CA 158022 || Sbjct 8165 CA 8164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545163011698000