Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq14742 536 1e-147 >seq14742 Length=52551 Score = 536 bits (594), Expect = 1e-147 Identities = 742/1029 (72%), Gaps = 7/1029 (1%) Strand=Plus/Plus Query 178936 TGGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCT 178995 ||||| |||| | ||||||||| | || || || ||||| ||||| |||||||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCA 37818 Query 178996 GGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCT 179055 || || || ||| | || ||||||| |||| |||| |||||| ||||||| ||| || Sbjct 37819 GGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACT 37878 Query 179056 TTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTT 179115 ||||| || |||||||| |||||| | ||| ||| ||| | |||||| |||||| Sbjct 37879 TTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTC 37938 Query 179116 CTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT-TG 179174 | || |||||||| || || ||||| | ||||| ||| ||| || || | ||| || Sbjct 37939 TTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATG 37997 Query 179175 GGGTCCTGAGTCTCAGGG-GAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATT 179233 ||| ||||| | || || || ||| | || ||||| ||| | || || ||||||| | Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACT-CGTTGGTGTCAATTAGGTGGTCTATGGACAT 38056 Query 179234 TCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGG 179293 | | ||| | || || | |||| |||||||||| ||| | ||||| |||||| | | Sbjct 38057 TTATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTG 38116 Query 179294 CACGTCTCA-TCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTA 179352 | ||| ||| | | | ||||| |||||||| |||||||| | | |||||| | || Sbjct 38117 CTCGT-TCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTT 38175 Query 179353 TTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCG 179412 || ||| || || | || |||||| | |||||||| | ||||| ||||| || Sbjct 38176 TTTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGT 38235 Query 179413 TTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACA 179472 |||||||| || || || || | ||| | | || || ||||| ||||| |||||||| Sbjct 38236 TTTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACT 38295 Query 179473 CTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCT 179532 | ||||| || ||||||||||| || |||||| | | || | |||||| | | |||| Sbjct 38296 TTAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCT 38355 Query 179533 ATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTT 179592 ||||| || | ||||| || || ||||| | ||||||||| || || |||||||| Sbjct 38356 ATTCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTC 38415 Query 179593 AAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTT 179652 || || || | || |||| || || || || || ||||| |||||||||||||| Sbjct 38416 CGTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTC 38475 Query 179653 TGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTG 179712 ||||| || || || |||||| | || ||||| |||||| | |||||||| | ||| Sbjct 38476 TGGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTT 38535 Query 179713 TTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAAT 179772 |||||||||| | ||||||||| | || ||||||| | ||||| ||||| | ||| Sbjct 38536 CTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAAT 38595 Query 179773 CTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAG 179832 | ||||||||||| || || ||||| || | ||||| || ||||| || ||||| Sbjct 38596 TTACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAA 38655 Query 179833 ACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCT 179892 || ||||| ||||| || ||| || | |||||||| | ||||||||| |||| | Sbjct 38656 ACTTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAA 38715 Query 179893 GATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACTG 179952 || |||||||||||| | | ||||| |||||||| ||||| ||||||| || || Sbjct 38716 GACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTA 38775 Query 179953 TGATTCAAT 179961 | | ||||| Sbjct 38776 T-AATCAAT 38783 Score = 286 bits (316), Expect = 4e-72 Identities = 272/348 (78%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 178062 GTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGG 178121 || |||||||| || ||||| || ||||||||||| ||||||||| | ||||||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 178122 GTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTC 178181 ||||| ||||| || | |||||||| ||||| || | || ||||| || | || Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 178182 CGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAA 178241 ||||| || || |||| || || ||| | || ||||| ||||| |||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 178242 ACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCG 178301 ||||| ||||| || || || ||||||||||| || ||||| ||||||||||| || || Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 178302 TTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGG 178361 ||||||||||| |||||| | ||||||||| | || || ||||| |||||||| || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 178362 TTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTC 178409 ||||| || | ||| | || || |||||||| ||| | || |||||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 226 bits (250), Expect = 3e-54 Identities = 277/373 (74%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 || || || ||| | ||| ||| | ||||| | || ||||||||||||| || | Sbjct 12271 TTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTCGGTGTTATC 12212 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || || | || |||| ||| |||| |||||| |||| ||| ||||||| || Sbjct 12211 ATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCATCGCTGCACC 12153 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || ||||| || || ||||| || || |||||||| | | || || ||||| Sbjct 12152 TCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACAA 12093 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 ||||||||||||||| ||||| || | || ||||| |||||| | || ||||| || || Sbjct 12092 CATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTTCTACCCAAT 12033 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 |||||||| |||| | ||||||||| | || ||||||||||||| |||| | | || Sbjct 12032 TTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGT 11973 Query 177857 CTTTCACTTCCTTATCGGCATCT-ATGCATATATGGGACGTGAGTGGGAACTTTCATACC 177915 | |||||| | | || || | ||| || ||||| ||||| |||||| | || |||| Sbjct 11972 TTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAATTATCTTACC 11914 Query 177916 GTCTAGGTATGCG 177928 || |||||||||| Sbjct 11913 GTTTAGGTATGCG 11901 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 177924 ATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTT 177983 ||||| || ||||| ||| || |||||||| || |||||||| || | ||||| || Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 177984 CTAGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 178043 | |||||||| |||| |||||||| ||||| |||| ||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 178044 ACTTTTAACTACATG 178058 ||||| |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605544363121000