Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq6492 120 2e-22 >seq6492 Length=3580 Score = 120 bits (132), Expect = 2e-22 Identities = 197/279 (71%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 94782 CTCGGCGTGGCGCACGCCAGCCTCCTGCATCTGCCGGTATCGGTCGTCCATCTCTACGGT 94841 |||| || ||||||||| || | ||||| | ||| ||||| |||||||| ||| Sbjct 2770 CTCGATGTTGCGCACGCCGAGCTTCGACATCTTCTTGTAGCGGTCCTCCATCTCC-CGGA 2828 Query 94842 GAG-CCACCGCAGCGTTTTCACCGCCTCGTCAGCCTCTGTAACCACGGGCTGGAGAAGGT 94900 | |||| ||||| |||||||| | | || || ||||| ||| ||||||| Sbjct 2829 CCGTCCACTTCAGCGCCACCACCGCCTTCTTCGGGTCGGTGACCACCGGCGTCAGAAGGT 2888 Query 94901 GGGGGATACCGTTGTACGGGGTGAGCTCGACACAT-TTGGGGTCGATCATGATGAGTTTG 94959 | ||||| |||| ||| | |||||| | ||| || |||||||||||||| || | Sbjct 2889 GCGGGATGCCGTCGTAGACCGAGAGCTCCAG-CATCTTCGGGTCGATCATGATCAGCCGG 2947 Query 94960 ACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGAC 95019 | | || || ||| ||||||||||||||| | | ||| | |||||| | ||| Sbjct 2948 CACTGCTCCGGCGTCAGCCGGTAGAGCAGCGACAGGATCATCGTGTTGATCGACACCGAC 3007 Query 95020 TTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGC 95058 |||||||| ||||| | ||| || ||||||| |||||| Sbjct 3008 TTGCCCGAGCCGGTGGTGCCGGCGACCAGCATGTGCGGC 3046 Score = 86.0 bits (94), Expect = 4e-12 Identities = 183/267 (69%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 94422 CTCGATCTCCCCATCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGCGCCCCCAC 94481 ||||| ||| | ||||||||||| | ||| || | || ||| |||| ||| || | Sbjct 2299 CTCGACCTCGTCGTCGGAGACGAAGGGGCCGTGCACGCGC-TGGA--TGCG-GCCGCCGC 2354 Query 94482 CGGC-AGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGA 94540 |||| | | | | | ||| ||| || | ||||||||||| || |||| | |||| Sbjct 2355 CGGCCATGTAGAGCATGTCGCCCTGGCCGAGCAGCTGCTCGGCGCCCTGCTCGCCGAGGA 2414 Query 94541 TCACCCGGCTATCGGTGAGGGACGCTGTGGC---GAACGACAGCCGCGAGGGCACGTTGC 94597 | ||||| ||| || | || | || | ||| || | |||| || | ||| Sbjct 2415 TGGTGCGGCTGTCGATGCGCGAGG---TGACCTGGAAGGAGACGCGCGTCGGGAAGTTCG 2471 Query 94598 TCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAA 94657 |||||| ||| || | || || || ||||| ||||||||||||| || || || | Sbjct 2472 CCTTGATCGTGCCGGTGATGACGTCGACCGAGGGACGCTGCGTCGCCATGATGACGTGGA 2531 Query 94658 TGCCGGCCGCACGCGCCTTCTGCGCGA 94684 ||||||| || |||||| ||||||||| Sbjct 2532 TGCCGGCGGCGCGCGCCATCTGCGCGA 2558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340054343610800