Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq14333 86.0 6e-12 seq14742 84.2 2e-11 >seq14333 Length=1560 Score = 86.0 bits (94), Expect = 6e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 146732 TAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGATTCCAGCT 146791 |||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| | Sbjct 1030 TAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCAGGTTCGAATCCTGTC 971 Query 146792 ACACCGACCA 146801 | ||||||| Sbjct 970 TCCCCGACCA 961 >seq14742 Length=52551 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 146584 ATTAGCTCAGTTGGT-AGAGCGCTCGACCGATAATCGAGAGGTCACTGGTTCAAGTCCGG 146642 ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | Sbjct 2345 ATTAGCTCAGTTGGTTAGAGCGCTCGCTTGATAAGCGAGAGGTCACTGGTTCAAGTCCAG 2286 Query 146643 TAT 146645 ||| Sbjct 2285 TAT 2283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477093619822000