Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq14319 215 1e-51 seq8309 181 3e-41 seq6368 143 7e-30 >seq14319 Length=508 Score = 215 bits (238), Expect = 1e-51 Identities = 354/497 (71%), Gaps = 24/497 (5%) Strand=Plus/Minus Query 9324 CCCAGGTGTCCACCATCCCGCGCATGAGCATCGAGAGCGGAAACACGGAC-GCGTTGTCG 9382 |||||| || | ||| | | || ||||||| ||||| ||||| ||| ||| ||| Sbjct 505 CCCAGGAATCGATCATGCAGGGCTGCAGCATCGCCAGCGGGAACACCGACTGCGCA-TCG 447 Query 9383 TCGATGAACGCGCACATCAGCAGGTTGGCGAAATCGAGTTCG--CTGTACTCCAGCCGCA 9440 ||||||||| ||||||||||||||||||||| ||| | || | ||||||| | |||| Sbjct 446 TCGATGAACTGGCACATCAGCAGGTTGGCGAACTCG--TCCGGCCCGTACTCCTGGCGCA 389 Query 9441 ACTGGTCGATGTCGAACAGGTTGCAGCCGCCGCGCAGCGCGTCCTCTACCGTCACGATCT 9500 || |||||||||||| |||| ||| ||||| | ||| ||||| | ||||| | | Sbjct 388 GCTCGTCGATGTCGAAGAGGTCGCAACCGCCCGCCTCCGCATCCTCGATCGTCAGCACAT 329 Query 9501 GGCGCCACTGACC--GTCAGCGCAGCGCATGCCGTTGCGCAGCGCGGTGTGGCTCACGTC 9558 | || | || | ||| | | | || ||||| |||||| | |||||| ||||| Sbjct 328 GCCGGAA--GATCTTGTCGGGCCCGAGCGCCCCGTTCTTCAGCGCCGCGTGGCTGACGTC 271 Query 9559 GATCTTGACCTGTTT---GTCCTT-GGCCTTGCCGC-GGTTGAACAGTG--CGCCGGACC 9611 || |||| | || |||||| |||| ||||| |||| |||| |||||| || Sbjct 270 GAA---GACCCGCTTCTCGTCCTTCGGCC--GCCGCCGGTTC--CAGTTGTCGCCGGTCC 218 Query 9612 AGAACGGGTAGGCCTCATGCGACAAGCTGGACGGCGTGGAGAAGTACGTTTGCCGCCAGT 9671 |||| |||||||| ||| || |||| |||| || | || |||| |||||| | Sbjct 217 AGAAGCCATAGGCCTCGTGCATCACGCTGCTGGGCGACGACAGATAGGTTTTCCGCCACT 158 Query 9672 GCTTGTGGATCGCCATGCCGGACGCGACCTTGCGCAGTTCCTGGAAGCGCGGCACCCAGA 9731 ||||||| ||||| || |||||||| ||| || | ||| || ||||| Sbjct 157 TCTTGTGGGCGGCCATCATCGAGGCGACCTTATTCAGGTCGTTGAACCGGAAGGTCCAGA 98 Query 9732 AGTACTCGTCGAAGTACAGGTTGCCGTGGTAGCTCTGCGCGGTGCGGGCGTTGGTCCCGA 9791 || ||||||||||||| | |||||||| |||| |||||| || |||||||| || || | Sbjct 97 AGAACTCGTCGAAGTAGAAATTGCCGTGATAGCCCTGCGCCGTCCGGGCGTTCGTGCCCA 38 Query 9792 GGAAGTACAGCGTCGCC 9808 ||||||| | |||||| Sbjct 37 GGAAGTAGATGGTCGCC 21 >seq8309 Length=800 Score = 181 bits (200), Expect = 3e-41 Identities = 295/425 (69%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 24939 GGCCACGGCCCGCGCGGTTGGCTTGCGCGCCAAGATCGACAACGACACCGGCTGGCACAA 24998 |||| |||| ||| || ||| ||||||||||| ||||| | || |||||||||||| Sbjct 364 GGCCGCGGCGGTCGCCGTCGGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAA 423 Query 24999 GACGCTTTCCAACGTGGCTGTGGGTGGCGTGACTGGCCTGTCGCGCGACGTTTTCTGGGA 25058 |||| | |||||||| || || ||||| |||||| | ||| | | || | Sbjct 424 GACGATCTCCAACGTCGCGGTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAGCTTCGC 483 Query 25059 CCTCCAGGACCCGGCGACCGACGCGGGCTACCTGAACGCCAACGAGGTGACCACGCTGGT 25118 ||| |||||||| |||||||||| ||| |||||||||| || || ||| ||||| | Sbjct 484 CCTGCAGGACCCCTCGACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGAT 543 Query 25119 TCACCGCGACGGCTACCGCTTCTGGGGCTCGCGCACGTGCAGCGCGGATCCGCTGTTCGC 25178 | || |||||| ||||||||||||| | || ||| | || ||| ||| Sbjct 544 CCGCCAGAACGGCTTCCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCA 603 Query 25179 CTTCGAGAACTACACCCGCACCGCCCAGGTGCTGGCCGACACCATGGCGGAAGCCCACAT 25238 ||||| | | | ||||||||||| | | || |||||||| || || | | || Sbjct 604 GTTCGAAAGCGCCGCCCGCACCGCCGACATCCTCAAGGACACCATCGCCGAGGGCATGAT 663 Query 25239 GTGGGCAAACGATCTGCCGATGACGCCGACGCTGGTCCGCGATCTGCTGGAGGGCATCAA 25298 |||||| ||| |||| ||||||| | |||| ||||| | | ||| |||||| Sbjct 664 GTGGGCGGTCGACAAGCCGCTGACGCCCAGCCTGGCGCGCGACATCATCGAGACCATCAA 723 Query 25299 CGCCAAGCTGCGCATGCTGACCCGCAACGGCTACCTGCTGGGCGGCGCCGCGTGGTTCGA 25358 ||||||| | ||| ||||| | | |||||| | |||||||||| || ||| | || Sbjct 724 CGCCAAGTTCCGCCAGCTGAAGGTCCAGGGCTACATCCTGGGCGGCGAGGCCTGGCTTGA 783 Query 25359 CCCGG 25363 |||| Sbjct 784 TCCGG 788 >seq6368 Length=557 Score = 143 bits (158), Expect = 7e-30 Identities = 344/510 (67%), Gaps = 29/510 (6%) Strand=Plus/Minus Query 12023 CCGATGCTCCAGGACGTGAACAAAGGCTGGCTGCAGAACCTGCGCGAACAGGCGCCGCAG 12082 ||| ||||||||||||| ||||| |||||||||||| |||||||||| | |||| Sbjct 515 CCGCTGCTCCAGGACGTCAACAAGGGCTGGCTGCAGTACCTGCGCGAGAACATGCCGACC 456 Query 12083 CGCGTCATGGAGGAAGGCAAAAAAGCGGCCGGCAAGATCATCGTCGGCGCGGGTG--GG- 12139 | |||| | |||||| | ||| || || |||| ||||||| ||| | || Sbjct 455 CACGTCTTCAGCGAAGGCGAGGAAGAGGACG---AGATTCGCGTCGGCTCGGCCGCCGGC 399 Query 12140 ---GACTACGGCAACCTGGACGCCCTGGTGTTCGACGTCGTGAACCAGCTGGT--CGAGC 12194 |||||| ||||| ||||||||||| | |||| || ||||| | | | ||| Sbjct 398 GCCGACTACAAGAACCTCGACGCCCTGGTCATGGACGCGGTCCACCAGTTCCTGCCCAGC 339 Query 12195 CGTGGTACGCCGAGGATCCGGAGCTGGTCGTGCTGTGTGG-TCGCAACCTGCTGGCCGAC 12253 |||||| | | || | | |||||| ||| || | || |||| | ||| Sbjct 338 --TGGTACCGCAACGACACCGGCCTGGTC-TGCATCGTCGATCCGGGCCTGGTCCACGAG 282 Query 12254 AAGTACTTCCCGCTGGTGAACAAAGACCGCGACCCGGTCCAGCAGATCGCGGCCGACCTC 12313 ||||||||| || || |||| || | ||| | | || |||| |||||| || Sbjct 281 AAGTACTTCAACCTCGTCAACATCGAGGAGAAGCCGACCGAAAAGGTCGCCGCCGACATC 222 Query 12314 ATCATCA------GCCAGAAGCGCATCGGCAACCTGCAGGCGGTGCGCGTGCCGTACTTC 12367 | | ||||| | || ||||| ||||| | | || || |||||| Sbjct 221 CTGCTGTCGCGGCGCCAGCTGGGC---GGCAA---GCAGGTCGCCCAGGTCCCCTACTTC 168 Query 12368 CCGGC-GAATGGCCTGCTGGTGACGCGCCTGGACAACCTGTCCATCTACTACCAGGAGAA 12426 ||| | | | | | ||| | || |||||||||||||| || |||||||||||||| Sbjct 167 CCGACCGGCTCGA-TCCTGATCACCCGCCTGGACAACCTCTCGATCTACTACCAGGACGG 109 Query 12427 CGCGCGCCGTCGCACGATCCTGGACAACGCGAAGCGCGATCGCATCGAGAACTACGAGTC 12486 | ||| || ||||||||| | |||||||| ||||| || ||| |||||||||| ||||| Sbjct 108 CAAGCGTCGCCGCACGATCGTCGACAACGCCAAGCGGGACCGCGTCGAGAACTATGAGTC 49 Query 12487 GAGCAACGACGCGTACGTGATCGAAGACCT 12516 ||||||| ||||| |||| ||||| Sbjct 48 CTCGAACGACGGCTACGTCCTCGAGGACCT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127860160195800