Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq15219 154 2e-31 seq8947 154 2e-31 seq2887 149 9e-30 seq10231 143 4e-28 seq9159 102 1e-15 seq3654 95.1 2e-13 seq2367 91.5 2e-12 seq2267 89.7 7e-12 seq13253 86.0 9e-11 >seq15219 Length=8991 Score = 154 bits (170), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| || | | ||| ||| ||| || Sbjct 1641 ATCTACAAGGTGCTCAAGCAGGTGCACCCAGACACTGGT-----ATC-TCCTCAAAGGCC 1588 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| || | || |||||| Sbjct 1587 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGATTGCCAGCGAGGCATCC 1528 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||| |||| |||| ||||||| ||| ||| | |||||||| |||||||| ||| Sbjct 1527 CGCTTGGCTCGCTACAACAAGAAGCCCACCATCACTTCTCGCGAGATTCAGACCGCAGTG 1468 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| ||| || || ||||||| |||||| || || |||||||||| Sbjct 1467 CGCCTGATCCTGCCTGGAGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 1416 >seq8947 Length=2826 Score = 154 bits (170), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| || | | ||| ||| ||| || Sbjct 144 ATCTACAAGGTGCTCAAGCAGGTGCACCCTGACACTGGT-----ATC-TCCTCAAAGGCC 197 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| || | || |||||| Sbjct 198 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGATTGCCAGCGAGGCATCC 257 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||| |||| ||||||| ||| ||| | |||||||| |||||||| ||| Sbjct 258 CGCCTGGCTCGCTACAACAAGAAGCCCACCATCACTTCTCGCGAGATTCAGACCGCAGTG 317 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| ||||| ||| || || ||||||| |||||| || || |||||||||| Sbjct 318 CGCTTGATCCTGCCTGGAGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 369 >seq2887 Length=2223 Score = 149 bits (164), Expect = 9e-30 Identities = 173/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || || ||||||||||||||||||||||| || | | ||| ||| ||| | Sbjct 1984 ATATATAAGGTGCTCAAGCAGGTGCACCCAGACACTGGT-----ATC-TCCTCAAAGGCT 1931 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| || | || |||||| Sbjct 1930 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGATTGCCAGCGAGGCATCC 1871 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||| |||| ||||||| ||| ||| | ||||||||||||||||| ||| Sbjct 1870 CGCCTGGCTCGCTACAACAAGAAGCCCACCATCACTTCTCGCGAGATCCAGACCGCTGTG 1811 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || |||||| ||| || || ||||||| ||||||||| || |||||||||| Sbjct 1810 CGTCTGATCCTGCCAGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 1759 >seq10231 Length=4455 Score = 143 bits (158), Expect = 4e-28 Identities = 174/233 (75%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||| ||||||||||||||||||||||| || | | ||| ||| ||| | Sbjct 144 ATCTATAAGGTGCTCAAGCAGGTGCACCCAGACACTGGT-----ATC-TCCTCAAAGGCT 197 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| || | || ||| || Sbjct 198 ATGTCTATCATGAACTCATTCATCAACGACATCTTCGAGAAGATTGCCAGCGAAGCATCC 257 Query 725031 CGCCTGGCGCGCTCCAACAAGC-GCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 |||||||| |||| ||||||| || | || ||| | |||||||| |||||||| || Sbjct 258 CGCCTGGCTCGCTACAACAAGAAGCCA-ACCATCACTTCTCGCGAGATTCAGACCGCAGT 316 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||| ||| || || ||||||| |||||| || || |||||||||| Sbjct 317 GCGCCTGATCCTGCCTGGAGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 369 >seq9159 Length=2836 Score = 102 bits (112), Expect = 1e-15 Identities = 106/135 (79%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 1456168 GACA-CTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGC 1456225 |||| |||||||||||| | || | | ||| || || ||||||||||| ||||| ||| Sbjct 1075 GACAGCTTTGCCGAGCGCTTGGTGGCATATGCTGCTGTGGAGGGCATCTTCTTCTCAGGC 1134 Query 1456226 AGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAG 1456285 || ||||| |||||||| |||||||||||||| ||| | ||||| || | || ||| || Sbjct 1135 AGCTTCTGTGCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCTGG-CCTCACCTTCAG 1193 Query 1456286 CAACGAATTTATCAG 1456300 ||| || | ||||| Sbjct 1194 CAATGAGCTCATCAG 1208 >seq3654 Length=3311 Score = 95.1 bits (104), Expect = 2e-13 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 ||||| |||||||||||||| ||||| ||| ||| | || || |||||||| ||| || Sbjct 1578 GGCGGTGGCAAGCGCAAGGGTGCCTTCGCCATCTATATTGAGCCCTGGCACGCAGACATC 1519 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | ||| || ||||| ||||||||||||| ||| |||||||| | || || Sbjct 1518 TTTGACTTCCTTGACCTGCGCAAGAACCACGGCA----AGGAGGAGAACC--GTGCCCGT 1465 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 ||||| || || ||||| |||| || ||||| ||| || ||| | | || Sbjct 1464 GATCTGTTCTATGGCCTCTGGATCAATGATCTGTTCATGAAGCGAGTGGAGCAGGACCAA 1405 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTG 262006 |||||| || || ||||| ||||| || |||||| Sbjct 1404 GACTGGAGTCTGTTCTGCCCCAATGAGGCTCCAGGCCTG 1366 >seq2367 Length=7310 Score = 91.5 bits (100), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAAC 262929 || || |||||| ||||||| | |||||| | | | ||||| || | |||||| Sbjct 166 AGTGGTCGCTGGAACTGGGATGAACTGCGTGAGAACATCAAGCAGCACGGTGTCCGCAAC 225 Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989 || |||| || || | |||||||| |||| || |||||||||||||||| |||| Sbjct 226 TCACTGCTTGTTGCCCCGATGCCCACAGCCAGCACCAGCCAGATCCTGGGCAACAACGAG 285 Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 || ||| | ||| ||||||||| |||||| ||| | || || || || || Sbjct 286 TGCTTTGAGCCCTACACATCCAACATCTATGTGCGCCGTGTGTTGTCTGGAGAGTTCACA 345 Query 263050 GTGGTCAACCGCCACCTG 263067 || ||||||| |||||| Sbjct 346 GTTGTCAACCAGCACCTG 363 >seq2267 Length=17667 Score = 89.7 bits (98), Expect = 7e-12 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||||| ||||||||||| || |||||||||| |||| || | | || Sbjct 15388 CAAGGCCATGTCTATCATGAACTCCTTCATCAACGACATCTTCGAGAAGATTGCTTCTGA 15447 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGC-GCAACACGATCGGCACGCGCGAGATCCAGA 725082 ||| | | || || |||| ||||||| || | || ||| | ||||||||||||| Sbjct 15448 AGCCAGCAGGCTTGCTCGCTACAACAAGAAGCCA-ACCATCACGTCTCGCGAGATCCAGA 15506 Query 725083 CCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | || ||||| |||| ||| || || || |||| ||| || || || |||||||| Sbjct 15507 CTGCTGTGCGATTGATTCTGCCAGGAGAGCTTGCCAAGCATGCTGTGTCTGAGGGCAC 15564 >seq13253 Length=5744 Score = 86.0 bits (94), Expect = 9e-11 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 |||| |||| ||||||| ||||||||||| || ||||||| || | || |||| Sbjct 1201 CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGATATCTTTGAGAAGATCGC 1260 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAG-CGCAACACGATCGGCACGCGCGAGA 725076 ||| | | ||||||||| || | ||||||| || | || || | | || || | Sbjct 1261 AGGAGAGTCTGCTCGCCTGGCTCGTTACAACAAGAAGCCA-ACTGTCACCTCACGTGAAA 1319 Query 725077 TCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136 | |||||||| |||||||| || ||| || || ||||||| ||| | || || || | Sbjct 1320 TTCAGACCGCAGTGCGCCTCATTCTGCCGGGGGAGCTGGCCAAGCATCCAGTGTCTGAAG 1379 Query 725137 GCACCA 725142 |||||| Sbjct 1380 GCACCA 1385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176246268928450