Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq14742 589 2e-163 >seq14742 Length=52551 Score = 589 bits (652), Expect = 2e-163 Identities = 747/1025 (73%), Gaps = 2/1025 (0%) Strand=Plus/Plus Query 159376 TGGTTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCT 159435 |||||||||| | ||||||||| | | ||| || ||||| ||||| |||||||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCA 37818 Query 159436 GGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACT 159495 || || || ||| | || ||||||| | || |||| |||||| ||||||| || ||| Sbjct 37819 GGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACT 37878 Query 159496 TTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTT 159555 ||| | || |||||||| || ||| | ||| ||| || | |||||| ||| || Sbjct 37879 TTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTC 37938 Query 159556 CTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT-TG 159614 | || |||||||| ||||| ||||| | ||||| ||| ||| || || | ||| || Sbjct 37939 TTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATG 37997 Query 159615 GGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTT 159674 ||| ||||| | ||||| ||||| || ||||| ||| | || || | ||| | || Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACATT 38057 Query 159675 TGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGC 159734 | ||||| | || || | |||| | | || || |||||| |||| |||||||||||||| Sbjct 38058 TATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTGC 38117 Query 159735 TCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTT 159794 |||| |||| | | ||||| |||||||||||||| ||||| | |||||| | ||||| Sbjct 38118 TCGTTCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTTTT 38177 Query 159795 TGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTT 159854 ||| || ||| | || || ||| | || || ||| ||||| ||||| |||||||| Sbjct 38178 TGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGTTT 38237 Query 159855 CGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914 || |||||||| || || | ||| | || || | || || ||||| |||||||| | Sbjct 38238 TGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACTTT 38297 Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974 ||||| ||||| |||||||| || || ||| | |||| | || || || ||||| || Sbjct 38298 AAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCTAT 38357 Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034 || ||||||||||| || |||||||| ||||||||||| || || |||||||| Sbjct 38358 TCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTCCG 38417 Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094 || ||| | || || |||| ||||| ||||| || ||||| || || ||||| ||||| Sbjct 38418 TGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTCTG 38477 Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154 ||| || || || || ||||| || || || || || |||||||| || |||||| | | Sbjct 38478 GTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTTCT 38537 Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214 ||| |||||| | ||||| |||| || ||||||| | |||| | ||||| || | Sbjct 38538 TGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAATTT 38597 Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274 |||||||| || ||||| || || ||| | ||||| || ||||| ||||| || || Sbjct 38598 ACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAAAC 38657 Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334 |||||||| || || || | || |||||||| | |||||||||||||| | || Sbjct 38658 TTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAAGA 38717 Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACTGTG 160394 |||||||||||| || | |||||||| |||||| ||||| | ||||| || || | Sbjct 38718 CCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTATA 38777 Query 160395 ATTAA 160399 || || Sbjct 38778 ATCAA 38782 Score = 289 bits (320), Expect = 3e-73 Identities = 273/348 (78%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 158180 GTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGG 158239 || |||||||| || |||||||| ||||||||||| ||||| ||| | ||||||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 158240 GTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTT 158299 ||||| ||||| || | |||||||| ||||| || | || ||||| || | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 158300 CGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAG 158359 |||||||| ||||||| || || ||| | || || || ||||||||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 158360 ACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 158419 || |||||||| || || || ||||| ||||| || ||||| ||||||||||||||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 158420 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 158479 ||||||||||| ||||| || ||||||||| | ||||| ||||| || || || || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 158480 TTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTC 158527 ||||| || | || | ||||| |||||||||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 264 bits (292), Expect = 1e-65 Identities = 267/345 (77%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 157703 AACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCTACGTTGCTTGCTGCAACT 157762 |||||||| || | |||||||||||||| | ||||| ||||| || | | || ||| Sbjct 12244 AACCGTTTATACATCGGTTGGTTCGGTGTTATCATGATCCCTACATTATTAACAGCTACT 12185 Query 157763 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGCGA 157821 ||||| |||||| |||| ||| ||||||| || || || || || || || || || || Sbjct 12184 -TCTGTATTCATCATCGCTTTCATCGCTGCACCTCCAGTTGATATCGATGGTATTCGTGA 12126 Query 157822 ACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTAG 157881 |||||| |||||||| | | || || |||||||||||||||||||| |||||||||| Sbjct 12125 GCCAGTTTCTGGTTCATTATTATACGGAAACAACATCATCTCTGGTGCTGTTGTTCCTAC 12066 Query 157882 TTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTGACGAGTG 157941 |||||||| || ||| | || |||||||| || |||||||| ||||| | || ||||| Sbjct 12065 ATCAAACGCTATTGGTTTACATTTCTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTG 12006 Query 157942 GCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTTCCTGATCGGCATCTATGC 158001 | | || ||||||||||||| |||| | | || | ||||||| | | || || | Sbjct 12005 GTTATACAACGGTGGTCCTTACCAATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTG 11946 Query 158002 CTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCG 158046 ||| ||||| ||||| |||||| | |||||||||||||||||||| Sbjct 11945 CTACATGGGTCGTGAATGGGAATTATCTTACCGTTTAGGTATGCG 11901 Score = 136 bits (150), Expect = 5e-27 Identities = 111/135 (82%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 158042 ATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTC 158101 ||||| || ||||| |||||| || ||||||||||| || || || | |||||||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 158102 CTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 158161 | |||||||| |||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 158162 ACTTTTAACTACATG 158176 ||||| |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 158526 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 158585 ||||||||||||| || | |||| ||| |||||||| || ||||| |||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 158586 TACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 158645 | | ||||| ||| | ||||||||||||||||| |||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 158646 CA 158647 || Sbjct 8165 CA 8164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572907783570000