Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq14742 488 6e-133 >seq14742 Length=52551 Score = 488 bits (540), Expect = 6e-133 Identities = 703/989 (71%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 161718 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 161777 || ||||| || ||||| || ||||| || ||||||||| | || ||||||| |||| Sbjct 37792 GACCGTTTTGTATTTGTAGGTTGGTCAGGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCA 37851 Query 161778 ATTGGCGGTTGGCTTACTGGCACAACTTTCGCAACGAGCTGGTATACCCATGGTCTCGCT 161837 |||| |||||| ||||||| |||||||| | ||| ||||| || |||||| | ||| Sbjct 37852 CTTGGAGGTTGGTTTACTGGTACAACTTTTGTAACATCATGGTACACACATGGTTTAGCT 37911 Query 161838 AGTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCT 161897 ||| ||| | || ||| ||||| | ||||| | ||| ||||| || || | Sbjct 37912 TCTTCATATTTAGAAGGTTGTAACTTCTTAACAGCAGCTGTTTCAACTCCTGCAAACAGT 37971 Query 161898 ATGGGTCATTCTCTTCTTCTTCTC-TGGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCTG 161956 |||| ||| ||| || || |||| ||||| ||||| || ||||| || || || || Sbjct 37972 ATGGCTCACTCT-TTATTATTCTTATGGGGACCTGAAGCACAAGGTGACTTTACTCGTTG 38030 Query 161957 GGTCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGG 162016 | ||| | || || || |||| ||| | || | ||||| | |||| ||||||| Sbjct 38031 GTGTCAATTAGGTGGTCTATGGACATTTATTGCTTTACATGGATCTTTCGGTTTAATTGG 38090 Query 162017 ATTCATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGCTAT 162076 ||| ||| | ||||| |||||| | || ||| || | | ||||| ||||||||||| Sbjct 38091 ATTTATGTTACGTCAATTTGAAATTGCTCGTTCAGTTAATTTACGTCCATACAATGCTAT 38150 Query 162077 TGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCA 162136 ||| ||||| | |||||| | |||||||| || ||| | || |||||||| || || Sbjct 38151 TGCTTTCTCGGCGCCTATTTCAGTTTTTGTTTCAGTTTTCTTAATTTACCCATTAGGACA 38210 Query 162137 GTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTT 162196 || | |||||||| ||||| ||||| || ||||| || || | ||| | || || Sbjct 38211 ATCTGGCTGGTTTTTTGCTCCTAGTTTTGGTGTAGCAGCTATTTTCCGTTTCATTTTATT 38270 Query 162197 TCTTCAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTAT 162256 | | ||||| |||||||||||||| | ||||| ||||| |||||||| || || ||| | Sbjct 38271 TTTCCAAGGCTTCCATAACTGGACTTTAAACCCATTCCACATGATGGGTGTAGCAGGTGT 38330 Query 162257 ACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATACGA 162316 |||| | || || ||| |||||||||||| | || |||||||| ||||||| || Sbjct 38331 TTTAGGAGCTGCTCTATTATGTGCTATTCACGGTGCTACTGTTGAAAACACATTATTTGA 38390 Query 162317 GGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTTA 162376 ||||| || || ||||| || || ||| | | ||||| | ||||| ||||| Sbjct 38391 AGATGGTGACGGTGCTAACACATTCCGTGCATTTAACCCAACACAAGCTGAAGAAACTTA 38450 Query 162377 TTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAA 162436 || ||||| || || ||||| |||||||| || || || || |||| || || || || Sbjct 38451 CTCAATGGTAACAGCGAACCGTTTCTGGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAA 38510 Query 162437 GCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTAT 162496 || |||||||| || |||||| | |||| |||||| | ||||| |||| || |||| Sbjct 38511 ACGTTGGCTTCACTTCTTCATGCTTCTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCTAT 38570 Query 162497 TGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAG 162556 ||| | |||| | ||| | || | |||||||| || ||||| || || || | Sbjct 38571 TGGTGTAGTTGGGTTAGCTTTAAATTTACGTGCTTATGACTTCGTTTCACAAGAAATTCG 38630 Query 162557 AGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGG 162616 ||||| || ||||| || || ||||| |||||||| || || ||| | | |||||||| Sbjct 38631 TGCAGCTGAGGATCCGGAATTCGAAACTTTCTACACAAAAAATATTATTTTAAATGAAGG 38690 Query 162617 ACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGA 162676 | ||||| ||| | || | |||||||| ||||| || | ||||| ||||| Sbjct 38691 TATCCGTGCTTGGATGGCTGCGCAAGACCAACCACATGAACGTCTTGTATTCCCTGAAGA 38750 Query 162677 AGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 ||| | ||| | || || || || |||| Sbjct 38751 AGTATTACCTCGTGGTAATGCTCTATAAT 38779 Score = 286 bits (316), Expect = 4e-72 Identities = 272/348 (78%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 160464 GTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGG 160523 || |||||||| || ||||| || |||||||| || ||||||||| | || |||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 160524 GTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTT 160583 ||||| ||||| || || |||||||| |||||||| | || ||||| || | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 160584 CGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAG 160643 |||||||| ||||||| || || ||| | || || || ||||||||||| ||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 160644 ACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCA 160703 || |||||||| || || || ||||||||||| || ||||| ||||||||||| || || Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 160704 TTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGG 160763 ||||||||||| |||||| | ||||||||| | || || ||||| ||||| || || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 160764 TTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTC 160811 ||||||||| | ||| || || |||||||||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 237 bits (262), Expect = 2e-57 Identities = 285/382 (75%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 159951 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 160010 |||| | ||| || || ||| | ||| ||| | ||||| | || ||||||||||| Sbjct 12280 TGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTC 12221 Query 160011 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGT 160069 || || | ||||| || || | || |||| || ||||| |||||| |||| ||| | Sbjct 12220 GGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCAT 12162 Query 160070 CGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 160129 |||||| || || || || ||||| || || ||||| || || |||||||| | | || Sbjct 12161 CGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATA 12102 Query 160130 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTT 160189 || |||||||||||||||||||| |||||||| | || ||||| |||||| | || || Sbjct 12101 CGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTT 12042 Query 160190 CTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCA 160249 ||| || || |||||||| |||| | ||||||||| | || ||||||||||||| ||| Sbjct 12041 CTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCA 11982 Query 160250 ACTCGTAGTATTTCACTTCCTTATCGGCATCTA-TGCATATATGGGACGTGAGTGGGAAC 160308 | | | || | |||||| | | || || | ||| || ||||| ||||| |||||| Sbjct 11981 ATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAAT 11923 Query 160309 TTTCATACCGTTTAGGTATGCG 160330 | || ||||||||||||||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 131 bits (144), Expect = 2e-25 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 160326 ATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTC 160385 ||||| || ||||| |||||| || ||||||||||| || || || |||| |||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 160386 CTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 160445 || | |||||| |||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 160446 ACTTTTAACTACATG 160460 ||||| |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 113 bits (124), Expect = 5e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 160810 TCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACG 160869 ||||||||||||| || | | || ||||||||||||| | ||||| ||||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 160870 TACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 160929 | | || |||||| | ||||||||||||||||| |||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 160930 CACTCGACCTCGCTGCTGCTGA 160951 || | ||| | || ||| ||| Sbjct 8165 CATTAGACTTAGCGTCTGTTGA 8144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559390525595000