Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq14742 479 3e-130 >seq14742 Length=52551 Score = 479 bits (530), Expect = 3e-130 Identities = 729/1029 (71%), Gaps = 7/1029 (1%) Strand=Plus/Plus Query 182358 TGGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCT 182417 ||||| |||| | || |||||| | | || || ||||| ||||| |||||||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCA 37818 Query 182418 GGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCT 182477 || || || ||| | || ||||||| |||| |||| |||||| ||||||| ||| || Sbjct 37819 GGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACT 37878 Query 182478 TTTGTTACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTT 182537 ||||| || |||||||| || ||| | |||||||| ||| | |||||| |||||| Sbjct 37879 TTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTC 37938 Query 182538 CTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT-TG 182596 | || |||||||| || || ||||| | ||||| ||| ||| || || | ||| || Sbjct 37939 TTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATG 37997 Query 182597 GGGTCCTGAGTCTCAGGG-GAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATT 182655 ||| ||||| | || || || ||| | || ||||| ||| | || || || |||| | Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACT-CGTTGGTGTCAATTAGGTGGTCTATGGACAT 38056 Query 182656 TCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTG 182715 | | ||| | || || | |||| | | ||||| || ||| | | ||||||||| ||| Sbjct 38057 TTATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTG 38116 Query 182716 CTCGCCTGATTGGAATCA-GACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTA 182774 |||| | | | | | | | || |||||||| |||||||| || | |||||| | || Sbjct 38117 CTCGT-TCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTT 38175 Query 182775 TTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCC 182834 || || || ||| | || || || || ||||| || |||||||| || || Sbjct 38176 TTTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGT 38235 Query 182835 TTTGGTGTCGCGGCGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACA 182894 |||||||| || || || ||| | ||| | || || | || || ||||| |||||||| Sbjct 38236 TTTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACT 38295 Query 182895 CTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCT 182954 | ||||| ||||| |||||||| || || ||| | | || | || || | ||||| Sbjct 38296 TTAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCT 38355 Query 182955 ATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTT 183014 || || |||| || || || || || || | ||||||||| || || |||||||| Sbjct 38356 ATTCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTC 38415 Query 183015 AAAGCGTTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTT 183074 || || | | || || | || || || || || ||||| |||||||| ||||| Sbjct 38416 CGTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTC 38475 Query 183075 TGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTG 183134 ||||| ||||| || |||||||| || ||||| |||||| | |||||||| ||| | Sbjct 38476 TGGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTT 38535 Query 183135 TTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAAT 183194 |||||||||| | ||||||||| | || ||||||| | ||||| | ||| | ||| Sbjct 38536 CTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAAT 38595 Query 183195 CTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAG 183254 | ||||||||||| || || ||||| ||| | ||||| || ||||| || ||||| Sbjct 38596 TTACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAA 38655 Query 183255 ACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCC 183314 || ||||||||||| || || || | |||||||| | ||||||||| |||| | Sbjct 38656 ACTTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAA 38715 Query 183315 GATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACTG 183374 || |||||||||||| | | |||||||||||||| ||||| | ||||| || || Sbjct 38716 GACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTA 38775 Query 183375 TGAACCAAT 183383 | || |||| Sbjct 38776 T-AATCAAT 38783 Score = 313 bits (346), Expect = 3e-80 Identities = 278/348 (80%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 181485 GTTTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGT 181544 ||||||||||| |||||||||||||| ||||| || ||||||||||| ||||| || ||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 181545 GTATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTC 181604 ||||||||||||||| | ||| ||||||||||||||| || || || || || | || Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 181605 CGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAG 181664 ||||| || ||||||| || || ||| | || ||||| ||||| ||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 181665 ACATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCA 181724 ||||||||||| || || || || ||||||||||| || || ||||||||||| ||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 181725 TTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGG 181784 ||||||||||| |||||| | ||||||||| | || || ||||| |||||||| || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 181785 TTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTC 181832 ||||| || | || | || |||||||| ||| | || |||||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 255 bits (282), Expect = 7e-63 Identities = 289/382 (76%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 180972 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 181031 |||| | ||| || || ||| | ||| ||| | ||||| | || ||||||||||| Sbjct 12280 TGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTC 12221 Query 181032 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGT 181090 || || | ||||| || || | || |||| ||| ||||| |||||| |||| ||| | Sbjct 12220 GGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCAT 12162 Query 181091 CGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 181150 |||||| || || || || ||||| || || ||||| || || |||||||| | | || Sbjct 12161 CGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATA 12102 Query 181151 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTT 181210 || |||||||||||||||||||| |||||||| | || ||||| |||||| | || || Sbjct 12101 CGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTT 12042 Query 181211 CTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCA 181270 ||| || || |||||||| |||| | ||||||||| | || ||||||||||||| ||| Sbjct 12041 CTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCA 11982 Query 181271 ACTCGTAGTCTTTCACTTCCTTATCGGCATTTA-TGCATACATGGGACGTGAATGGGAAC 181329 | | | || | |||||| | | || |||| ||| |||||||| |||||||||||| Sbjct 11981 ATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAAT 11923 Query 181330 TCTCTTACCGCTTAGGTATGCG 181351 | |||||||| ||||||||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 122 bits (134), Expect = 1e-22 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 181347 ATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTC 181406 ||||| || ||||| ||| || |||||||||||||| ||||| || |||| |||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 181407 CTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGT 181466 | |||||||| |||| ||||||||||||||||| | ||||| | || |||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 181467 ACATTCAACTACATG 181481 || ||||||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 181831 TCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACG 181890 ||||||||||||| || | | ||| ||||| ||||| | ||||| ||||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 181891 TGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCC 181950 | |||||||||| | || |||||||| ||||||||||| || ||||||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 181951 C 181951 | Sbjct 8165 C 8165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614492947868000