Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq14742 459 3e-124 >seq14742 Length=52551 Score = 459 bits (508), Expect = 3e-124 Identities = 701/991 (71%), Gaps = 6/991 (1%) Strand=Plus/Plus Query 159929 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 159988 || ||||| || ||||| || ||||| || ||||||||| | || ||||||| |||| Sbjct 37792 GACCGTTTTGTATTTGTAGGTTGGTCAGGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCA 37851 Query 159989 ATTGGCGGTTGGCTTACTGGAACAACTTTCGCAACGAGCTGGTATACCCATGGACTCGCT 160048 |||| |||||| ||||||| |||||||| | ||| ||||| || ||||| | ||| Sbjct 37852 CTTGGAGGTTGGTTTACTGGTACAACTTTTGTAACATCATGGTACACACATGGTTTAGCT 37911 Query 160049 AGTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCT 160108 ||| ||| | || ||| ||||| | ||||| | ||| ||||| || || | Sbjct 37912 TCTTCATATTTAGAAGGTTGTAACTTCTTAACAGCAGCTGTTTCAACTCCTGCAAACAGT 37971 Query 160109 ATGGGTCATTCTCTTCTTCTTCTC-TGGGGTCCTGAGGCTCAAGGGGA-TTTCGTCAGGT 160166 |||| ||| ||| || || |||| ||||| ||||| || ||||| || ||| || | | Sbjct 37972 ATGGCTCACTCT-TTATTATTCTTATGGGGACCTGAAGCACAAGGTGACTTTACTC-GTT 38029 Query 160167 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTG 160226 || ||| | || || || |||| ||| | || | ||||| | |||| |||||| Sbjct 38030 GGTGTCAATTAGGTGGTCTATGGACATTTATTGCTTTACATGGATCTTTCGGTTTAATTG 38089 Query 160227 GATTCATGCTCCGTCAGTTTGAACTGGCACGTCTCA-TCGGTATCCGTCCTTACAATGCT 160285 |||| ||| | ||||| |||||| | || ||| ||| | | | ||||| ||||||||| Sbjct 38090 GATTTATGTTACGTCAATTTGAAATTGCTCGT-TCAGTTAATTTACGTCCATACAATGCT 38148 Query 160286 ATTGCGTTCTCTGGTCCTATTGCTGTCTTTGTCAGCGTATTCCTCATCTACCCATTGGGT 160345 ||||| ||||| | |||||| | || ||||| || ||| | || |||||||| || Sbjct 38149 ATTGCTTTCTCGGCGCCTATTTCAGTTTTTGTTTCAGTTTTCTTAATTTACCCATTAGGA 38208 Query 160346 CAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTG 160405 || || | |||||||| ||||| ||||| || ||||| || || | ||| | || Sbjct 38209 CAATCTGGCTGGTTTTTTGCTCCTAGTTTTGGTGTAGCAGCTATTTTCCGTTTCATTTTA 38268 Query 160406 TTCCTTCAAGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCTGGT 160465 || | ||||| || || |||||||| | ||||| ||||| |||||||| || || ||| Sbjct 38269 TTTTTCCAAGGCTTCCATAACTGGACTTTAAACCCATTCCACATGATGGGTGTAGCAGGT 38328 Query 160466 ATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTAT 160525 | |||||| || || | |||| || || || | |||||| || |||||| | | | Sbjct 38329 GTTTTAGGAGCTGCTCTATTATGTGCTATTCACGGTGCTACTGTTGAAAACACATTATTT 38388 Query 160526 GAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACT 160585 |||||||| || || || || || || ||| | | ||||| | ||||| ||| Sbjct 38389 GAAGATGGTGACGGTGCTAACACATTCCGTGCATTTAACCCAACACAAGCTGAAGAAACT 38448 Query 160586 TATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAAC 160645 || || ||||| || || ||||| |||||||| || || || || |||| || || || Sbjct 38449 TACTCAATGGTAACAGCGAACCGTTTCTGGTCTCAAATTTTTGGGGTTGCTTTCTCAAAT 38508 Query 160646 AAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCAGT 160705 || || |||||||| || |||||| | |||| |||||| | |||||||||| || | Sbjct 38509 AAACGTTGGCTTCACTTCTTCATGCTTCTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCT 38568 Query 160706 ATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATT 160765 ||||| | |||| | ||| | ||| | |||||||| || ||||| ||||| ||| Sbjct 38569 ATTGGTGTAGTTGGGTTAGCTTTAAATTTACGTGCTTATGACTTCGTTTCACAAGAAATT 38628 Query 160766 AGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAA 160825 | ||||| || ||||| ||||| || || |||||||| || || || | | |||||| Sbjct 38629 CGTGCAGCTGAGGATCCGGAATTCGAAACTTTCTACACAAAAAATATTATTTTAAATGAA 38688 Query 160826 GGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAA 160885 || | ||||| ||| | || | |||||||| ||||| || | ||||| ||| Sbjct 38689 GGTATCCGTGCTTGGATGGCTGCGCAAGACCAACCACATGAACGTCTTGTATTCCCTGAA 38748 Query 160886 GAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 160916 ||||| | ||| | || || || || |||| Sbjct 38749 GAAGTATTACCTCGTGGTAATGCTCTATAAT 38779 Score = 295 bits (326), Expect = 7e-75 Identities = 274/348 (79%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 158883 GTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGG 158942 || |||||||| || |||||||| ||||||||||| ||||| ||| | ||||||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 158943 GTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTT 159002 ||||| ||||| || | |||||||| ||||| || | || ||||| || | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 159003 CGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAA 159062 |||||||| ||||||| || || ||| | || ||||| ||||| |||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 159063 ACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 159122 ||||| || || || || || ||||||||||| || ||||| ||||||||||||||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 159123 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 159182 ||||||||||| ||||| || ||||||||| | ||||| ||||| || || || || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 159183 TTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTC 159230 ||||| || | || | ||||| |||||||||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 233 bits (258), Expect = 2e-56 Identities = 284/382 (74%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 158370 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 158429 |||| | ||| || || ||| | ||| ||| | ||||| | || ||||||||||| Sbjct 12280 TGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTC 12221 Query 158430 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGT 158488 || || | ||||| || || | || |||| || ||||| |||||| |||| ||| | Sbjct 12220 GGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCAT 12162 Query 158489 CGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 158548 |||||| || || || || ||||| || || ||||| || || |||||||| | | || Sbjct 12161 CGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATA 12102 Query 158549 TGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTT 158608 || |||||||||||||||||||| ||||| || | || ||||| |||||| | || || Sbjct 12101 CGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTT 12042 Query 158609 CTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCA 158668 ||| || || |||||||| |||| | ||||||||| | || ||||||||||||| ||| Sbjct 12041 CTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCA 11982 Query 158669 ACTCGTAGTCTTTCACTTCCTTATCGGCATCTA-TGCATATATGGGACGTGAATGGGAAC 158727 | | | || | |||||| | | || || | ||| || ||||| |||||||||||| Sbjct 11981 ATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAAT 11923 Query 158728 TTTCATACCGCTTAGGTATGCG 158749 | || ||||| ||||||||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 131 bits (144), Expect = 2e-25 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 158745 ATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTC 158804 ||||| || ||||| |||||| || ||||| ||||| || || || |||| |||||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 158805 CTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 158864 || |||||||| |||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 158865 ACTTTTAACTACATG 158879 ||||| |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 159229 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 159288 ||||||||||||| || | |||| ||| |||||||| || ||||| |||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 159289 TACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 159348 | | |||||||| | ||||||||||||||||| |||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 159349 CACTCGACCTTGCTGCTGCTGA 159370 || | ||| | || ||| ||| Sbjct 8165 CATTAGACTTAGCGTCTGTTGA 8144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552361551448000