Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq9159 96.9 5e-15 >seq9159 Length=2836 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 |||||| ||||||| ||| | ||||||||||| || || | || || || ||| Sbjct 1244 AAGCAGCCGAAGTCTGTATGCAATCCCTCATCTCTGCTGATGAGCTCATTGCTGAAGGTG 1185 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAA 39732 || |||||||| | |||||||| |||||||| || |||||| || ||| | || || || Sbjct 1184 AGGCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGCA-CAGAAGCTGCCTGAGAA 1126 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAAC 39762 ||||||||| || || || ||| |||| || Sbjct 1125 GAAGATGCCCTCCACAGCAGCATATGCCAC 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686769486309000