Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_027334.1 Length=47800 Score E Sequences producing significant alignments: (Bits) Value seq716 134 4e-27 >seq716 Length=2258 Score = 134 bits (148), Expect = 4e-27 Identities = 300/443 (68%), Gaps = 37/443 (8%) Strand=Plus/Plus Query 33347 GTTCGCCTTGGGGATCACCCGCTGATAATCGGGGTATGTCCCGTCGATCAGCTTCGATGC 33406 ||||| || ||||| || || || |||||| | || ||||||||||||||||| | Sbjct 1143 GTTCGACTGCGGGATGACGCGGCCGTAGTCGGGGAAGGTGCCGTCGATCAGCTTCGAGGT 1202 Query 33407 CAGCCGAAGGTCGCCCGCCTCGAGAACGATGCGGCTCTGGTCAATGGCGACCTGGACGGT 33466 |||| | | |||| || ||||||| ||| | | | | || |||||| Sbjct 1203 CAGCACCACGGCGCC------GACGCTGATGCGGATCTTGGCGTCCGACAGCTCGACGGT 1256 Query 33467 CTCGCCGGCCTTCGTCGCCTCGGCCATCATGCCGAACAGGCTGACCATCTTGCGCGGCAC 33526 | | |||| || | | ||| || | | || | || ||| ||||||||||||| Sbjct 1257 GACTTCCGCCTCCGGCTCGTCGAGCAGCTTCTGGATCTCGCCGACGGTCTTGCGCGGCAC 1316 Query 33527 GATGATGCCGGCGAAAT----CGGGCAGGTTGTCTCGGGCCATG--GCCAGCCGGGAC-A 33579 ||||||||| || || ||||| | ||| ||||| | | | ||| || | | Sbjct 1317 GATGATGCC--CGGCATGCCGCGGGC--GCCGTCGGGGGCCGTCATGTCGGCCTGGGCGA 1372 Query 33580 GGCGGTGGCCGTCGGTTGCTACGGCGACGA-------GGGCGCCTTCGTG----CGG-GT 33627 |||||||||||||||| || |||||| || | |||| ||| ||| || Sbjct 1373 GGCGGTGGCCGTCGGTCGCGACGGCGCGGAACTTCGCGCCCGCCGGCGTCTCCACGGTGT 1432 Query 33628 GCAGGTAGATGCCATTGAGGTAGTAGCGGGTTTCCTCGCTGGAGATCGCGAA---GCTGC 33684 | | | ||||||| ||||| ||||||||| | |||||| ||||||||||||| | ||| Sbjct 1433 GGAAGAAGATGCCGTTGAGATAGTAGCGGATCTCCTCGGTGGAGATCGCGAACTGGGTGC 1492 Query 33685 AG-CAATCGGCAATGCGGGTCAGCGCCGCCGGTGGCAGCGTGAACCGGGCGCTGGCCTCG 33743 | | ||| || || ||||| || || ||||||||||| ||| |||| |||| Sbjct 1493 GGTCGATCAGC----CGCTTCAGCTCCTTCGCCGGCAGCGTGAAGCGGTGGCTGAGCTCG 1548 Query 33744 CCGGCGCTCATGTCGGGGAAATC 33766 ||| || | ||||||||||| || Sbjct 1549 CCGACGGTAATGTCGGGGAAGTC 1571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152808952338900