Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3654 118 1e-21 seq11139 93.3 5e-14 seq3169 87.8 2e-12 seq2692 86.0 7e-12 seq9432 82.4 9e-11 >seq3654 Length=3311 Score = 118 bits (130), Expect = 1e-21 Identities = 175/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || ||| | || || ||| | || ||||| ||| Sbjct 2125 CCTCAGCACATGCTCATGCGTGTTGCCCTTGGCATCCATATGCGCAACCTTGATGCTGCT 2066 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 || | || ||| || | |||| | | ||||| || |||| || ||||||||| Sbjct 2065 GTGCAAACCTACCACTTGCTGTCTGAGCGCTGGTTCACCCATGCAAGCCCCACCCTCTTC 2006 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || |||||||| || || || || || |||||||||||| ||| || ||||| ||| Sbjct 2005 AACGCTGGTACCCCCAGGCCACAGCTGAGCAGTTGCTTCCTGATCTGCAGCAAGGGTGAC 1946 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || |||| ||||||| ||||||| ||||||||| ||||||||| | || || Sbjct 1945 AGCATTGACGGCATCTATGACACTCTTAAGGAGTGTGCAGTCATCTCAAAGAGTGCAGGA 1886 Query 104462 GGTATTGG 104469 || ||||| Sbjct 1885 GGCATTGG 1878 >seq11139 Length=1709 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 9698 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGG-TTGATTTTCGCGAGCGACTTC 9756 |||||||| || ||||| || |||||||||||||| || | | ||| | || ||| Sbjct 371 CCCACGGCGTCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTCTTG-GCCTGTTC 313 Query 9757 AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGC 9816 || | || || ||||| | ||||| ||||| || |||||||| || |||| | | | Sbjct 312 GAACATGTCGCGCACACGGCTTGCGCCGACACCGACGAACATCTCGACGAAGTCCGAGCC 253 Query 9817 GGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 9875 || | || | || |||||| || | |||||||| ||||| |||||||| || |||| Sbjct 252 GG-AGATGGTGAAGAAGGGCACGCCCGCCTCACCCGCGATGGCGCGGGCGAGCAGGGTCT 194 Query 9876 TACCCGTACCTGGC 9889 | || || || ||| Sbjct 193 TGCCGGTGCCGGGC 180 >seq3169 Length=13646 Score = 87.8 bits (96), Expect = 2e-12 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 9611 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9670 ||||| || ||||||||||||| || ||||| || || || |||| ||||| || || Sbjct 10703 TCAAATCCGTCCATCTCTGTCAGCAGCTGGTTGATGGTCTGCTCCCTCTCATCGTTGCCT 10762 Query 9671 GGCATACC-ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 9729 || | |||||||| || || ||||| |||||||||||||||||||||| ||| Sbjct 10763 C-CACCCAGACCAGCACCACGCTGACGACCCACAGCATCAATCTCATCAATGAAGATGAT 10821 Query 9730 GCATGGT 9736 ||| ||| Sbjct 10822 GCAGGGT 10828 >seq2692 Length=17539 Score = 86.0 bits (94), Expect = 7e-12 Identities = 246/377 (65%), Gaps = 15/377 (4%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| | || || || || || || | ||| | | |||| || ||||| ||| Sbjct 12380 CGGTCAAACCTGCCGGGCCGGAGCAGAGCTTGATCCAACACATCAGGCCGGTTCGTGGCG 12439 Query 9584 GCGATG------ACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGT 9637 |||||| || ||| | || | || | ||||| ||||||| |||||||| || Sbjct 12440 GCGATGCAGATGACCACATTGTCTTTGTCGCTGTCAAACCCATCCAGCTCTGTCAGGAGC 12499 Query 9638 TGGTTAATAGTTTGTTCCCGTTCATCATT-----CGCTG-GCATACCACCAGCACTGCGT 9691 || || | || || ||||| |||||||| |||| ||| || | | |||| | Sbjct 12500 TGATTCAGCGTCTGCTCCCGCTCATCATTGCCAACGCTCCGCAAACGCATATCTCTGCCT 12559 Query 9692 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 9751 | | | || ||||||||||| || |||||||||||| || | | ||| || Sbjct 12560 T---TGGCAACTGCATCAATCTCGTCGATGAAGACGATGGCAGGAGCTTCCTTGCGGGCA 12616 Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811 |||| | || || || ||| ||||||||| ||||| | | ||||||||| | Sbjct 12617 TTGGCAAACAACTCACGCACCCGCATGGCGCCCATGCCAACGTAAAGCTCCACAAACTCG 12676 Query 9812 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 ||| || || |||||| |||| | ||| || || | ||||| || | | Sbjct 12677 CTGGCTGATATGCTGAAGAAGGGCACATCCGCTTCGCCAGCGACTGCTCGTGCTAACAAG 12736 Query 9872 GTCTTACCCGTACCTGG 9888 || ||||| ||||| || Sbjct 12737 GTTTTACCAGTACCAGG 12753 >seq9432 Length=2999 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/191 (71%), Gaps = 14/191 (7%) Strand=Plus/Plus Query 9696 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTTCGCGAGC-- 9750 |||| | ||||||||||||||||||||||| ||||| ||| ||| | ||| || Sbjct 1443 TTCCAATGGCATCAATCTCATCAATGAAGATGATGCTAGGTGCCTGACT---GCGGGCCT 1499 Query 9751 GACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAG 9808 ||| |||| || |||| ||| |||| | |||||||| ||||||||||||| ||| Sbjct 1500 GAC--CAAACAGGTCCC--TCACTCTTGCAGGACCCACACCCACAAACATCTCCATGAAG 1555 Query 9809 TTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868 | || | || | |||||||||| || |||||| || |||| ||| || Sbjct 1556 TCTGAACCAGAGATGCTCAGGAAGGGGACACCAGCTTCACCAGCTGTGGCCTTGGCAAGC 1615 Query 9869 AGAGTCTTACC 9879 |||||||| || Sbjct 1616 AGAGTCTTGCC 1626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583142507419000