Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_028676.1 Length=149218 Score E Sequences producing significant alignments: (Bits) Value seq3220 111 2e-19 >seq3220 Length=1218 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 112670 GATCATGCCGAGAGCCTGGAGATAGGTGTCCAGGATAGCTTCCTGTTCCATGCGTTCATC 112729 || ||||||||| || ||| ||| || ||||| | ||||| ||| ||| || | Sbjct 1134 GACCATGCCGAGGGCGGCGAGGTAGAGCTCGAGGATGGTCTCCTGCTCCTCGCGCTCGGC 1075 Query 112730 AGCATCCTGTCGACGAAGAGCAATGACCTTTCGGAGAATCTTCGTGTCGAAGCCCATCGA 112789 | |||| || || || || |||| ||| ||||| ||||||||||| | Sbjct 1074 GGGGTCCTTCTTGCGCAGCGCGATCACCTGCTTGAGGATCTTGGTGTCGAAGCCGTTGCC 1015 Query 112790 CTTTGCTTCTCCGAAGACGTCCTTGATGTCATCGCCGATTGTCCGCTTCTCTTCTTCGAG 112849 ||| ||||| || |||||||||||||||| || |||| | | ||||||||| ||||| Sbjct 1014 CTTCGCTTCGGCGTAGACGTCCTTGATGTCGTCCGCGATCGCCTTCTTCTCTTCCTCGAG 955 Query 112850 GCGTTCGATACGCTCGATGAAAGCTCTCAGCT-GATCGCGTGCTACTCCG 112898 || ||||| ||||||| ||| || | ||||| | ||||| || || ||| Sbjct 954 CCGCTCGATGCGCTCGACGAAGGCGCGCAGCTGGTTCGCG-GCGACGCCG 906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477272783478000