Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq8309 158 3e-34 >seq8309 Length=800 Score = 158 bits (174), Expect = 3e-34 Identities = 259/367 (71%), Gaps = 10/367 (3%) Strand=Plus/Minus Query 5733 TTCAGCTCACGGAATTTGGCATTGATGCCGTCAACGATGTCGCGAATCAGCGTTGCGGTG 5792 ||||||| ||||| ||||| |||||| || | ||||||||| ||| | | || Sbjct 744 TTCAGCTGGCGGAACTTGGCGTTGATGGTCTCGATGATGTCGCGCGCCAGGCTGGGCGTC 685 Query 5793 ATGGGCTTGTCCACCGCCCACAT-ATGCGCCTCAGCCATCGTGTCGGCCAGCACCTGCGC 5851 | |||||||| ||||||||||| |||| |||| || || ||||| || | | || Sbjct 684 AGCGGCTTGTCGACCGCCCACATCATGC-CCTCGGCGATGGTGTCCTTGAGGATGTCGGC 626 Query 5852 GGTGCGGGTGTAGTTTTCAAAGAGGAACAGCGGGTCATCAGAGCAGGTACGGTTACCCCA 5911 |||||||| | | |||| || |||| ||| || ||||||||||| |||| ||||| Sbjct 625 GGTGCGGGCGGCGCTTTCGAACTGGAAGGCCGGCTCGTCAGAGCAGGTCTGGTTGCCCCA 566 Query 5912 GAATCGGAAACCGTCGCGGCGAATCAGCGTAGTGACGCCTGACTCGTTAAGCAGGTCAGC 5971 ||| ||||| |||| |||| ||||||| |||||||| | |||| || | | | || Sbjct 565 GAAGCGGAAGCCGTTCTGGCGGATCAGCGCGGTGACGCCGGCGGCGTTCAGGACGCCGGC 506 Query 5972 ATCGGTGCCGGACTCCTGCAAATCCCAGAATACAGA---TGC-GCTGATGCCGGTAACAC 6027 ||||| || ||||||| | ||| | || ||| | | | |||| || | Sbjct 505 GTCGGTCGAGGGGTCCTGCAGGGC---GAA-GCTGATCTTGCGGGTCAGGCCGACGACGC 450 Query 6028 CGTTTACCCCGACGTTGGACAGCGTTTTATGCCAGCCCTGCTCCTGGTCGATTTTAGCGC 6087 |||| ||| |||||||||| | ||| || |||||||| |||| ||||| || |||| Sbjct 449 CGTTGACCGCGACGTTGGAGATCGTCTTGTGCCAGCCGACTTCCTCGTCGAGCTTGGCGC 390 Query 6088 GCAGACC 6094 |||| || Sbjct 389 GCAGGCC 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104418277657650