Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq8309 158 2e-34 >seq8309 Length=800 Score = 158 bits (174), Expect = 2e-34 Identities = 259/367 (71%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 23145 GGACTGCGTGCCAAAATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGG 23204 || ||||| ||||| ||||| |||| |||||||| || ||| | |||||||||| | Sbjct 383 GGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCGCG 442 Query 23205 GTAAACGGTGTTACCGGCATCAGC-GCA---TCTGTATTCTGGGATTTGCAGGAGTCCGG 23260 || ||||| || |||| | | | ||| || | ||| | ||||||| || Sbjct 443 GTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAGC-TTC---GCCCTGCAGGACCCCTC 498 Query 23261 CACCGATGCTGACCTGCTGAACGAGTCAGGCGTCACAACGCTGATTCGTCGTGACGGTTT 23320 ||||| || | | | ||||||| | |||||||| ||||||| || | |||| || Sbjct 499 GACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGCTT 558 Query 23321 CCGCTTCTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACAC 23380 |||||||||||| |||| ||||||||||| || ||| |||| || |||| | | | Sbjct 559 CCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCAGTTCGAAAGCGCCGC 618 Query 23381 CCGCACCGCGCAGGTGCTGGCCGACACGATGGCTGAGGCGCA-CATGTGGGCGGTGGACA 23439 ||||||||| | | || ||||| || || |||| ||| ||||||||||| |||| Sbjct 619 CCGCACCGCCGACATCCTCAAGGACACCATCGCCGAGG-GCATGATGTGGGCGGTCGACA 677 Query 23440 AGCCCATCACCGCAACGCTGATTCGCGACATCGTTGACGGCATCAATGCCAAATTCCGTG 23499 |||| | || | | ||| ||||||||| | || |||||| ||||| ||||| Sbjct 678 AGCCGCTGACGCCCAGCCTGGCGCGCGACATCATCGAGACCATCAACGCCAAGTTCCGCC 737 Query 23500 AGCTGAA 23506 ||||||| Sbjct 738 AGCTGAA 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93418797356550