Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq8309 114 2e-21 >seq8309 Length=800 Score = 114 bits (126), Expect = 2e-21 Identities = 266/396 (67%), Gaps = 10/396 (3%) Strand=Plus/Plus Query 14526 TCGGCCTGCGTGCTTACATCGACCAGACTGTCGGCTGGCACAAAACCCTGTCTAACGTTG 14585 |||||||||| || | ||||| || |||||||||||||| || | || ||||| | Sbjct 381 TCGGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCG 440 Query 14586 GTGTACAGGGAGTTACCGGCATCAGCGCC----TCAGTGTTCTGGGATTTGCAGGCATCC 14641 || | || || |||| | | | | |||| ||| | |||||| || Sbjct 441 CGGTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAGC-TTC---GCCCTGCAGGACCCC 496 Query 14642 GGCACCGATGCTGACCTTCTCAACGAGGCCGGGGTTACAACTCTGGTACGCAAGGACGGT 14701 ||||| || | | | || |||| ||||| || || | ||| | ||| || |||| Sbjct 497 TCGACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGC 556 Query 14702 TTCCGCTTCTGGGGTAACCGCACCTGCTCAGATGACCCGCTTTTTCTGTTTGAGAACTAC 14761 |||||||||||||| |||| |||||||| || || ||| || | ||| || | | | Sbjct 557 TTCCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCAGTTCGAAAGCGCC 616 Query 14762 ACCCGTACCGCGCAGGTACTGGCCGACACGATGGCTGAAGCGCA-CATGTGGGCGGTCGA 14820 |||| ||||| | | || ||||| || || | || ||| |||||||||||||| Sbjct 617 GCCCGCACCGCCGACATCCTCAAGGACACCATCGCCG-AGGGCATGATGTGGGCGGTCGA 675 Query 14821 TAAGCCCATTACCGCCACGCTCATTCGTGACATTGTTGACGGCATCAATGCCAAATTCCG 14880 ||||| | || ||| || || ||||| | || |||||| ||||| ||||| Sbjct 676 CAAGCCGCTGACGCCCAGCCTGGCGCGCGACATCATCGAGACCATCAACGCCAAGTTCCG 735 Query 14881 CGAGCTGAAAACAAACGGCTACATCGTGGACGGTGA 14916 | ||||||| | ||||||||| ||| ||| || Sbjct 736 CCAGCTGAAGGTCCAGGGCTACATCCTGGGCGGCGA 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95005691547750