Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq14536 98.7 7e-16 >seq14536 Length=11643 Score = 98.7 bits (108), Expect = 7e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 |||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||| | ||| Sbjct 2239 TACTGAGCTCCAAAGTGTCTCCACTGGAAGCCATACACTGGTCCCAGGTCCCCCACCTCC 2180 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 ||||| || |||| || ||| | || |||||| | |||| ||||||| || | Sbjct 2179 CTGTGGCTGAGGCCCTGCTGGTCAAGGAACTCTCTGCTGCTGTTGCCGTCCCAAATGTGA 2120 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 || || || || | ||| |||| || || || | || |||||||||||||||| Sbjct 2119 ACGCCTTTGTCCTGCAACTCCTTGGCAGAAGTTGAGCCACGGATGAACCACAGCAGCTCC 2060 Query 27679 TC 27680 || Sbjct 2059 TC 2058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369434132837975