Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq2519 134 4e-27 seq16013 96.9 1e-15 seq11482 91.5 5e-14 >seq2519 Length=537 Score = 134 bits (148), Expect = 4e-27 Identities = 134/174 (77%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 30821 TGATGCTATCGAGGTTGTGGCGTAGGCCGGAGAACGAGAACCACACCCGTCGGTTGCGGG 30880 ||||||| ||||||||||| | | |||| ||| | | | | || || || | || Sbjct 537 TGATGCTGTCGAGGTTGTGCCTCAACCCGGCGAAGGCATAGCTGATACGGCGATTTCTGG 478 Query 30881 TGCGGATGAACTTCTCGCCGATCTCGAAGTAGGCGTTGAGCCAGGGTTCGGACCGGATCG 30940 | |||||| ||||||||||||| ||||||||| | | ||| |||||||||||||||| Sbjct 477 TCCGGATGTACTTCTCGCCGATGTCGAAGTAGTCCGCCAACCACGGTTCGGACCGGATCG 418 Query 30941 CCTGCTTGACCTCCTCCATAGAGGAGTCTTCCAGGCTGTTCATGTACTCCCGGC 30994 || ||||| ||||||||| ||||| || || |||||||||| | |||||||| Sbjct 417 CCGCCTTGATCTCCTCCATGGAGGATTCGTCAAGGCTGTTCAGATGCTCCCGGC 364 >seq16013 Length=2360 Score = 96.9 bits (106), Expect = 1e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 34043 GGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCC 34102 |||| ||| ||||| || || || ||| | || ||| |||||||||||||||| | Sbjct 2135 GGTGGTAGTAGTCGTCGCGATAGACAAACCACACCATGTCCGCGTCCTGCTCGATCGAGC 2194 Query 34103 CGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGT 34162 | || |||||||||||||| | |||||| ||||||| | |||||||| | | || Sbjct 2195 CCGATTCGCGCAGGTCCGAGAGCATCGGGCGCTTGTCCTCGCGCTGCTCGACCGCACGCG 2254 Query 34163 TGAGCTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 |||||||| ||| ||||||| || | |||||| |||| || Sbjct 2255 AAAGCTGCGAGAGCGCGATCACCGGCACCGAGAGCTCCTTGGCGAG 2300 >seq11482 Length=9116 Score = 91.5 bits (100), Expect = 5e-14 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 34053 CTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCG 34112 |||||| ||||| | |||||| | |||||||||||||||||||||| || || ||||| Sbjct 4437 CTCGTCGCGGTAGATGAACATCACGACGTCGGCGTCCTGCTCGATCGAGCCCGATTCGCG 4496 Query 34113 CAGGTCCGACATCATCGGTCGCTTGT--TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGC 34170 |||||| | | ||| ||||||| || || ||| ||| | |||| ||||||| Sbjct 4497 CAGGTCGGCGAGTTGCGGGCGCTTGTCGTC-GCGGCT-CTCGACCTGGCGGGAGAGCTGC 4554 Query 34171 GACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 |||||| |||| | || | | |||||| |||| || Sbjct 4555 GACAGCGCGATGATCGGCACCGCGAGCTCCTTGGCGAG 4592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160433083100250