Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq2471 223 2e-53 >seq2471 Length=3256 Score = 223 bits (246), Expect = 2e-53 Identities = 516/764 (68%), Gaps = 19/764 (2%) Strand=Plus/Minus Query 794 GACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGA--TGATCGCACCGGCACCG 851 |||||| ||||||| | | || || ||| ||||| | ||| || |||||||| | Sbjct 2961 GACCTGCTGCGCGAGCTGATCGACACCGGC--GTCGAGCGGCCTGACCGGACCGGCACGG 2904 Query 852 GCACGCTGAGCAA-GTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCGCTG 910 |||||| || | ||||||| | |||||| | ||| ||| ||| |||||||||||| Sbjct 2903 GCACGC-GATCGCTGTTCGGCCGCACGCTGCGCTTCGATCTCCGCGACGGCTTCCCGCTG 2845 Query 911 GTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCTCAGT 970 |||| |||||||| || || | ||| ||||| | |||||||| || Sbjct 2844 CTCACGACGAAGCGGATCTTCTGGCGCGGCGCGGCGACGGAACTGATCTGGTTCCTGAGC 2785 Query 971 GGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACGAGTGGGCC 1030 ||| || ||| | |||||||| ||||||||||| |||||||||||||||||| Sbjct 2784 GGCTCGACCAACATCCGCTATCTCAACGAGAACGGCGTCACGATCTGGGACGAGTGGGCC 2725 Query 1031 GACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAG 1090 |||| | ||| | ||||| || ||||||||| ||||||||| |||| | | | Sbjct 2724 GACGAGGCCGGCGAACTCGGCCCGGTCTACGGCAAGCAGTGGCGCGCCTGGGAGGGTGCC 2665 Query 1091 GACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGAGCTGCTTCGCGAGGAC 1150 ||||| | | ||| | |||||| || | | |||| | | | ||| || Sbjct 2664 GACGGGG-----TGGTGCAC-GACCAGCTCGCCGATCTCGTGACGGCGATCCGCACCAAC 2611 Query 1151 CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCA 1210 || |||||| ||| || | | | ||||||||||| || ||| || |||||| Sbjct 2610 CCCACCTCGCGGCGGCTGCTGTTCACGGGCTGGAACGTCGGCGAGCTCGGCCGCATGGCG 2551 Query 1211 CTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTC-TCGCTGCA 1269 || | || |||||||| | | |||| ||||||| ||| ||||||||| || || Sbjct 2550 CTGCCGCCCTGCCACATGACCTACCAGTACTACGTCGCCGAGGGCCGGCTCAGCGGGGC- 2492 Query 1270 GGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGC 1329 | | ||||||||| || |||| |||||||| | | || |||||| | || Sbjct 2491 GCTGTACCAGCGCTCGGCCGACACCTTCCTCGGCCTCGGCTGGAACATCGCCGAGGCAGC 2432 Query 1330 GCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGAC 1389 ||| || |||||| | ||||||||| ||| || || || || || ||||| Sbjct 2431 GCTGCTGATCCACATGCTGGCGCAGCAGACCGATCTCGACGTCGGCGAACTCGTCTGGTT 2372 Query 1390 CGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCG 1449 ||||| |||| || ||||| ||| ||| |||| |||||| | |||||||| || Sbjct 2371 CGGCGCCGACACGCATCTCTACGTCAATCACATCGAGCAGGCGAAGCTGCAGCTCGAGCG 2312 Query 1450 ACGA-CCGCGGCCCTACCCGAGGCTCGTGCTACACCACGCGCC-GTCGA--TCTTCGACT 1505 ||| |||||||| | |||| | || | | | | | ||| | ||| ||||| || Sbjct 2311 -CGAGCCGCGGCCGTTCCCGCGCCTGTCGATCCGTCGCAAGCCGGCCGACCTCTTCAGCT 2253 Query 1506 ACCGGTACGAGCACATCCACCTCGTGAACTACGACCCGCACCCG 1549 || |||||| || || | ||||| |||||| ||||||||| Sbjct 2252 ACGCCTACGAGGACTTCGAGCTCGTCGGCTACGATCCGCACCCG 2209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296072642368725