Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq12887 82.4 8e-11 >seq12887 Length=5378 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 47308 GGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGGTTGAG 47367 || ||||| ||| | || || || ||| || | || | ||| ||||||| |||||| Sbjct 5094 GGTGGTCATCACATCAATGTGAATGTGCTGAACAGGGAGATGTTGATGGATGCTGTTGAG 5153 Query 47368 CACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGCTTCAAC 47427 ||||| || || ||||| | ||||| ||||| || || || || |||| ||||| | Sbjct 5154 CACCCTGAGAAGTACCCCAATCTGACGATTCGTGTCAGTGGTTATGCTGTGCACTTCAGC 5213 Query 47428 TCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTC 47472 ||||| | || ||||||| || || || |||||||| ||| Sbjct 5214 AAATTGACTCGTGATCAGCAGCTGGAGGTGATTGCTCGTACCTTC 5258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539788102018000